Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4031 ATGGTGTTCATGGATTTTGAATGGTTGTTCCAAATTCCAAGTGTCCCTTGGTCTTCAGCAATGTTTACCTTGCTGGCTACAATAGGAGGATTCTTAGTGTATCTGTATGGGCCCTACTGGGGTGTGAGGAAAGTTCCAGGTCCACCATCTGTGCCTCTGATAGGACACCTTCCCTTGCTGGCTAAGTATGGCCCTGATGTCTTTTCAGTCCTTGCCAAGCAATATGGCCCAATCTACAGATTTCATATGGGAAGACAACCTCTAATAATCATAGCAGATGCAGAGCTTTGCAAAGAGGCAGGCATCAAAAAATTTAAAGACATTACAAACAGAAGCATTCCCTCTCCCATTTCTGCATCCCCCCTTCACCAAAAGGGTCTCTTCTTCACCAAAGATTCACAATGGTCTACCATGAGAAACACCATATTATCACTCTACCAGCCATCACACTTATCCAGATTAGTGCCAACAATGCAGTCATTTATAGAATCAGCAACTCAAAATCTAGATTCTCAAAATGAAGACTTCATCTTTTCTAATCTTTCGCTCAGCTTGGCAACTGATGTGATTGGACAAGCAGCATTTGGTGTTGATTTTGGCCTCTCGAGGCCTCAATCAGTGCGTGATGAAAGTGGCAACAAGGAAGTAAGGGGTTCAGGTGCTGGTAATGAAGTATCAGATTTCATTAACCAACACATTTACTCCACAACCCAACTCAAGATGGACCTATCTGGTTCCTTCTCCATCATACTGGGTTTACTTGTCCCAATTCTCCAGGAGCCATTTAGGCAGATTCTGAAGAGAATTCCAGGCACCATGGACTGGAAAATCGAGTGTACTAACCGAAAACTAAGTGGCCGTCTTGATGAAATTGTAGAGAAGAGAATGAAGGATAAGGTCAGAAGTTCCAAGGACTTCTTGTCACTCATTCTAAATGCAAGAGAATCAAAAACTGTTTCAGAAAATGTGTTCACACCTGACTATATCAGTGCTGTTACTTATGAGCACCTGCTTGCAGGATCAGCAACCACATCCTTTACCTTGTCTTCCATTGTCTATTTGGTTGCTGGGCATCCAGAAGTTGAGAAAAAGATGCTTCAAGAGATTGATGGGTTTGGCCCAGTAGATCAGACACCAACTTCTCAAGATCTTCAAGAGAAGTTTCCTTACCTTGATCAGGTGATCAAAGAGGCCATGAGATATTACACAGTCTCTCCATTGGTTGCAAGAGAAACATCAAATGAAGTAGAGATTGGAGGTTACCTTCTTCCAAAGGGGACTTGGGTCTGGTTAGCGCTTGGAGTTGTAGCAAAAGATCCCAGAAACTTTCCGGAGCCAGAAAAGTTCAAACCGGAGAGGTTTGATCCCAAATGTGAAGAAATGAAAAGAAGACATCCTTATGCTTTCATACCATTTGGAATTGGTCCTCGGGCTTGCATTGGTCAGAAATTTTCCCTGCAAGAAATCAAGCTGTCTCTGATTCACTTATATAGGAAATACTTGTTTCGGCATTCACCTAATATGGAGAATCCCTTAGAACTTGAATATGGCATAGTGCTCAACTTCAAGCACGGTGTCAAGGTTAGAGCCATAAAAAGAACAGAGAGGAGCTGCTAA 1617 0.4255 MVFMDFEWLFQIPSVPWSSAMFTLLATIGGFLVYLYGPYWGVRKVPGPPSVPLIGHLPLLAKYGPDVFSVLAKQYGPIYRFHMGRQPLIIIADAELCKEAGIKKFKDITNRSIPSPISASPLHQKGLFFTKDSQWSTMRNTILSLYQPSHLSRLVPTMQSFIESATQNLDSQNEDFIFSNLSLSLATDVIGQAAFGVDFGLSRPQSVRDESGNKEVRGSGAGNEVSDFINQHIYSTTQLKMDLSGSFSIILGLLVPILQEPFRQILKRIPGTMDWKIECTNRKLSGRLDEIVEKRMKDKVRSSKDFLSLILNARESKTVSENVFTPDYISAVTYEHLLAGSATTSFTLSSIVYLVAGHPEVEKKMLQEIDGFGPVDQTPTSQDLQEKFPYLDQVIKEAMRYYTVSPLVARETSNEVEIGGYLLPKGTWVWLALGVVAKDPRNFPEPEKFKPERFDPKCEEMKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIHLYRKYLFRHSPNMENPLELEYGIVLNFKHGVKVRAIKRTERSC* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4031 538 PANTHER THROMBOXANE-A SYNTHASE 14 534 - -
Lja1g4031 538 PANTHER CYTOCHROME P450 FAMILY PROTEIN 14 534 - -
Lja1g4031 538 SUPERFAMILY Cytochrome P450 39 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4031 538 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4031 538 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4031 538 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4031 538 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4031 538 PRINTS E-class P450 group I signature 432 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4031 538 PRINTS E-class P450 group I signature 469 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4031 538 PRINTS E-class P450 group I signature 479 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4031 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 472 481 IPR017972 GO:0005506|GO:0016705
Lja1g4031 538 Pfam Cytochrome P450 46 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4031 538 Gene3D Cytochrome P450 35 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4031 538 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4031 538 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4031 538 PRINTS P450 superfamily signature 470 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g4031 538 PRINTS P450 superfamily signature 479 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4031 Lja-Chr1 51069177 51074172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4031 83 533 Cytochrome P450 AT2G26170 74.723 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4031 K20771 - gmx:100797803 950.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4031 1 51069177 51074172 Lja1g4031 1 51069177 51074172 ECH
Lja5g2983 5 58537160 58544857 Lja1g4031 1 51069177 51074172 PCT