Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4030 ATGGGTGGCTCAGGGAAATGGGTAAAAGCATTAATCGGGCTCAAAAAACCTGAGAAACATCAACATGTGAAGGAAGGTGGAAAGAGCAAGAAATGGAGGCTATGGAGGAGTTCTTCAGGGGATAAAGGTTTCAAAGGAAACCACAAAGCAGCTTCTGAAGGGTCTGATTCTCCACCTGCAGCAGCAGCAGCAGATGCTTTCACCGCCGCGGTAGCCGCCGTGGTTCGAGCTCCTCCTAAGGATTTTAGGCTGGTTAGGCAAGAATGGGCCACTATAAGAATTCAAACCGCTTTCCGTGCCTTCTTGGCAAGAAGGGCTTTGAGGGCTTTGAAGGCAGTGGTGAGGCTTCAAGCACTTGTCCGGGGTCGACAGGTGAGAAAGCAGGCTGCAGTGACATTGAGGTGCATGCAGGCGCTGGTCCGTGTTCAAGCCCGAGTAAGAGCTCGTCGCGTGCGAATGTCCATAGAGGGACAAGCTGTGCAGACCATACTTAATGAGCGACGCAGCAAACTTGATCTTTTGAAGCAAGCAGAGGAAGGGTGGTGTGATAGCAAAGGAACGTTGAATGATGTGAAAACTAAATTACAAATGAGGCAAGAAGGAGTGTTCAGGAGAGAGAGAGCAATTGCATACTCTCTTGCTCAGAAGCAATGCAAGTTAACTCCAAGCACTAATTCCCGAACAAATGCCTCGTTTCTCTCTCTCAAGAATCAAGAGACTGAGAAAGCTAATGGGGGATGGAGTTGGTTGGAAAGATGGATGGCAGCAAAGCCATGGGAGAGTAGATTGATGGAACAACAATCTCAGGCTGAAGGCTTAGAGAAAACCCCACCACCAAAGAAATTTGTGGAAACCTTTGTAAGCTCAAATTCAAAACCATGCTTGGTCAAGATCAAGAAGAACAATGTTACAACAAGAATTTCTGCTAGGCCTCCTCATACCGGACAAGCTACTCGTTCATCCTCAAGCCCAAGTTCTGAGTTTCGGTACGATGAGAGTTCTGCATCATCTTCTATATGTACATCTACAACACCAATGTCAGGGAATACTTGTGACAGGACTGAGGATAGTAGTAACACTAGGCCAAGTTACATGAACCTGACTCAGTCAACCAAGGCAAAGCAAAAAACAAGTAGTCATACTCATACATACAACAGAGCTCAAAGGCAGCAGTCTATGGACGAGTTTCAATTTCTCAACAGGGAAGCAGTTTTCTATTCTAAAAGCACTGCTGATTCTGACCCATCAATCAACTTTTCAAGGCCACTTCAACTACCAATTCACTCGGGCAAGAGTTCATTGATGCCACGGTGA 1314 0.4635 MGGSGKWVKALIGLKKPEKHQHVKEGGKSKKWRLWRSSSGDKGFKGNHKAASEGSDSPPAAAAADAFTAAVAAVVRAPPKDFRLVRQEWATIRIQTAFRAFLARRALRALKAVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQTILNERRSKLDLLKQAEEGWCDSKGTLNDVKTKLQMRQEGVFRRERAIAYSLAQKQCKLTPSTNSRTNASFLSLKNQETEKANGGWSWLERWMAAKPWESRLMEQQSQAEGLEKTPPPKKFVETFVSSNSKPCLVKIKKNNVTTRISARPPHTGQATRSSSSPSSEFRYDESSASSSICTSTTPMSGNTCDRTEDSSNTRPSYMNLTQSTKAKQKTSSHTHTYNRAQRQQSMDEFQFLNREAVFYSKSTADSDPSINFSRPLQLPIHSGKSSLMPR* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4030 437 MobiDBLite consensus disorder prediction 18 49 - -
Lja1g4030 437 MobiDBLite consensus disorder prediction 409 427 - -
Lja1g4030 437 ProSiteProfiles IQ motif profile. 111 138 IPR000048 GO:0005515
Lja1g4030 437 PANTHER IQ-DOMAIN 5-RELATED 1 436 - -
Lja1g4030 437 Pfam IQ calmodulin-binding motif 111 128 IPR000048 GO:0005515
Lja1g4030 437 Pfam IQ calmodulin-binding motif 89 108 IPR000048 GO:0005515
Lja1g4030 437 ProSiteProfiles IQ motif profile. 87 115 IPR000048 GO:0005515
Lja1g4030 437 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 436 - -
Lja1g4030 437 MobiDBLite consensus disorder prediction 18 58 - -
Lja1g4030 437 MobiDBLite consensus disorder prediction 303 392 - -
Lja1g4030 437 MobiDBLite consensus disorder prediction 409 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4030 Lja-Chr1 51061678 51064417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4030 1 426 IQD Protein Family AT2G26180 59.217 4.67e-144 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4030 - - gmx:100799714 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2982 5 58534129 58536914 Lja1g4030 1 51061678 51064417 PCT