Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3966 ATGAGAACCCTCCCCACCACTACCACAACTTCACTAGCACCCACAGCCACCGCATCATTGATGCGCTCGTCGTGGCACTCTCCGATACCGTACCTCTTCGGCGGGCTTGCTGCTATGTTAGGTCTCATAGTTTTTGCTCTGTTGATCTTGGCTTGCTCTTTTTGGAAACTCTCTGGTCATTTACGGAGCGAAGAAAATGAAAACAGGGACATGGAAAACGGTGAGAAAGAGTGTGATTCTGCAACTGAAAACAAGGTCTACGAGGAGAAGATTCTGGTAATCATGGCCGGAGATCAAAACCCAACATTCTTGGCCACCCCTGTTTTCCCCAAGTTGTTATCTCTCTCTGATGGGGTGAAGACCCAGCTTGAGGAAAACACCGAAAATCACGAAGCTTCTGAGAAATCGCAGAAAGAAATGGAAAACCATCTTCAACCTGCAACACAACAACCACAAGAACAAGAAACCCAACAACAAAGCTAG 483 0.47 MRTLPTTTTTSLAPTATASLMRSSWHSPIPYLFGGLAAMLGLIVFALLILACSFWKLSGHLRSEENENRDMENGEKECDSATENKVYEEKILVIMAGDQNPTFLATPVFPKLLSLSDGVKTQLEENTENHEASEKSQKEMENHLQPATQQPQEQETQQQS* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3966 160 Coils Coil 64 84 - -
Lja1g3966 160 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 5 142 IPR040359 GO:0080143
Lja1g3966 160 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 5 142 - -
Lja1g3966 160 MobiDBLite consensus disorder prediction 123 141 - -
Lja1g3966 160 MobiDBLite consensus disorder prediction 120 160 - -
Lja1g3966 160 MobiDBLite consensus disorder prediction 142 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3966 Lja-Chr1 50333577 50334059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3966 23 107 Glutamine Dumper (GDU) Family AT5G57685 63.636 1.40e-34 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3966 - - gmx:100500572 164.851