Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3959 ATGGAGACAAGATCATTGATCCTTTCCTTACTAGTCTCTTCTCTTCTTATCCTTTCTTTTGCTGTCTCTTTTGCAGCTAGTAGCCTCTCTTTCAACTTCTATGCAGCTTCATGCCCAACAGCAGAGTTTATCATAAGAAATGCAGTTAGCTCTTCCTCCTCTACTGATCCTTCCATTCCTGGGAAGCTCCTCCGCTTGGTTTTCCATGATTGCTTTGTGGAGGGATGTGATGCGTCTTTGATGCTGCAAGGGAATAACACAGAACAAAGTGATCCAGGAAACAGAACTGTTGGAGGATTTTCAGCGATAGAATTAGCAAAAAGAGTCCTTGAGATGTTCTGTCCAGGAGTTGTTTCTTGTGCAGACATAATTGCTCTAGCTGCTAGAGATGCAGTTGAAATTGCTGGCGGACCAAGGATTCAGATTCCAACAGGTAGGAGAGATGGGATGGTTTCAGTGGCTTCAAATGTGAGACCAAACATTGTTGACACCAGTTTCACAATGGATGAGATGATGAAGCTCTTTTCCAACAAAGGACTATCTTTACTTGATCTTGTAGTCCTTTCAGGAGCTCATACCATAGGAACGGCTCATTGCAACACATTCAGAGATCGTTTCCAAGAAGACTCAAAGGGAAAGCTTAGACCCATTGACCAAACCCTTGATAGTAGCTATGCTAATCAGCTCATGAAACAGTGTCCTGTAGGTGCACAACCTTCTGCAACTGTGAACAACGATCCTGAAACATCTATGGCCTTTGACAACCAGTACTACAGAAATCTTCTAGCTCACAAAGGTCTTTTCCAGTCTGATTCTGTTCTGTTGAATAATAATAGCACAAGGAAAATAGTGGAAGATTTTGCAAATGATCAAGACCTTTTCTTTGAAAATTGGGGCTTGTCATTCCTGAAGCTCACCAGTGTTGGAGTAAAGACAGATAATGAGGGTGAAATAAGACGATCTTGTGGAACAACTAATGCATGA 984 0.4197 METRSLILSLLVSSLLILSFAVSFAASSLSFNFYAASCPTAEFIIRNAVSSSSSTDPSIPGKLLRLVFHDCFVEGCDASLMLQGNNTEQSDPGNRTVGGFSAIELAKRVLEMFCPGVVSCADIIALAARDAVEIAGGPRIQIPTGRRDGMVSVASNVRPNIVDTSFTMDEMMKLFSNKGLSLLDLVVLSGAHTIGTAHCNTFRDRFQEDSKGKLRPIDQTLDSSYANQLMKQCPVGAQPSATVNNDPETSMAFDNQYYRNLLAHKGLFQSDSVLLNNNSTRKIVEDFANDQDLFFENWGLSFLKLTSVGVKTDNEGEIRRSCGTTNA* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3959 327 PANTHER PEROXIDASE 18-RELATED 15 324 - -
Lja1g3959 327 Gene3D Peroxidase, domain 2 162 305 - -
Lja1g3959 327 SUPERFAMILY Heme-dependent peroxidases 29 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja1g3959 327 PANTHER PEROXIDASE 25-RELATED 15 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3959 327 CDD secretory_peroxidase 29 322 IPR033905 GO:0004601|GO:0042744
Lja1g3959 327 Gene3D - 32 326 - -
Lja1g3959 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Lja1g3959 327 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3959 327 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3959 327 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3959 327 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3959 327 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3959 327 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3959 327 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3959 327 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3959 327 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3959 327 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3959 327 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3959 327 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3959 327 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3959 327 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3959 327 ProSiteProfiles Plant heme peroxidase family profile. 28 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3959 327 Pfam Peroxidase 46 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3959 Lja-Chr1 50251604 50254492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3959 6 326 Peroxidase AT4G31760 61.059 2.57e-149 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3959 K00430 K18328 gmx:102664900 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3959 1 50251604 50254492 Lja1g3959 1 50251604 50254492 ECH