Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3943 ATGGCTGGTTCCTCTGCTTCTCTTTTGCTCCTATTCCTTCTCTTTGGCTTCTCTGCAGCTAAGGAACTCTTAGTTGGTGGCAAGACAGATGCATGGAAGGTTCCATCTTCTGAAGCAGATTCCCTCAATCAATGGGCTGAAAAGTCTCGCTTCAAAGTCGGAGACTATCTTGTGTGGAAATATGATGGTGGGAAAGACTCTGTGTTGCAAGTAAACAAGGAGGACTATGGTAGTTGCAACACCTCCAACCCCATTGAAGAGTACAAAGATGGGAACACTAAGGTGAAGCTTGACCGTCCTGGACCTCACTACTTCATCAGTGGAGCAAAGGGTCACTGTGAGAAGGGGCAGAAGTTGGTTGTGGTGGTTATGACTCCAAAGCACAGCAGAGACAGAGCAATTTCCCCTGCATCTTCTCCAGCAGAGTTGGAAGAAGGTCCTGCTGTTGCTCCTACTAGCAGTGCTACAGTTTTGCAGAGTGGCTTTGTGGCGGTTCTGGGAGTGTTGGCTATGTACGTGATGTGA 525 0.4819 MAGSSASLLLLFLLFGFSAAKELLVGGKTDAWKVPSSEADSLNQWAEKSRFKVGDYLVWKYDGGKDSVLQVNKEDYGSCNTSNPIEEYKDGNTKVKLDRPGPHYFISGAKGHCEKGQKLVVVVMTPKHSRDRAISPASSPAELEEGPAVAPTSSATVLQSGFVAVLGVLAMYVM* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3943 174 PANTHER EARLY NODULIN-LIKE PROTEIN 3 5 170 - -
Lja1g3943 174 Gene3D - 21 136 IPR008972 -
Lja1g3943 174 PANTHER BLUE COPPER PROTEIN 5 170 IPR039391 GO:0009055
Lja1g3943 174 SUPERFAMILY Cupredoxins 20 124 IPR008972 -
Lja1g3943 174 ProSiteProfiles Phytocyanin domain profile. 21 125 IPR003245 GO:0009055
Lja1g3943 174 Pfam Plastocyanin-like domain 32 117 IPR003245 GO:0009055
Lja1g3943 174 CDD OsENODL1_like 21 124 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3943 Lja-Chr1 49976047 49976908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3943 7 169 Phytocyanin Superfamily AT2G25060 56.707 1.42e-64 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3943 - - gmx:100305551 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3943 1 49976047 49976908 Lja1g3943 1 49976047 49976908 ECH