Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3911 ATGACCATAATAGAATGTATTGCAGTATTTGCAGCCACTCTCTTCTTCATATTCATCCACATTTGGAGACGCAATAGAGATGTTCTGCTCCCAAATTGGCCAATACTTGGTATGCTACCAGCAATTTGGCGTAATGTGTCAGATTTCAATGATTTTGCAACTTTGGTCTTGAAACACAATGGAGGCACTGCAAAGTTTCAAGGACCATGGTTCACAGACACAAACTTTATCTTCACCAGCGATTCCATGAATGTCAACCATATCACAAGCAAGAATTTTGGTAACTATGGGAAAGGCCCCAATTTCCACGACATATTTGAAGTTCTTGGAAATGGTATTTTCAATTCTGATTCTCATGATTGGAAACAACAGAGGGCAATGCTTCATTCCATTTTCCAAAAGAAAAGCTATCTGATCTTCATTCAACAAACCATTGAGAAGAAGGTGGAGAATTGCTTACTACCAATTCTAACTCAAATATCCATAGTAGGAGCCACTGTGGACTTACAAGATATCTTTGAGAGGTTCACCTTTGACATCAGCAGCACCACTGTATTTGGATTTGATCCTCATTGCCTCCCTAGCAGGTTCCAGGAGCTCTCAGAGATTTCTTGTGTAAAATCTTTGCCTATTATGGAAGATGCAATTTTCTACAGGCACATCACTCCAACATTTATATGGAAGCTACAAAAATGGCTGCAAATTGGTCTAGAGAGAAATTTCAATGTAGCCCAAGAAAATCTTGACCAATTCGTGCGTCAATGTATAGCGTATTCCAAACGTGAAGATCAGCAGAGTGAAGAAGAGGTGGAGGAATCAGATTTTTACTTGCTGAAAGCTGTAATGAAGGAAGGAAGTGGGAAGGGGGAAATGAGTGATGAGTTTCTTAGAGACATTGCTATGAACCTCTTGGCAGGAGGAGATAGCGTACTCGCTGCAGGTCTCAGTTGGCACTTGTGGCTTGTCTCAACTCATCCAATTGTGGAAGGTAAAATTATTCAAGAAATCAAAGATAATTGTATAATCCAAGAAGATAATTGTCACGACCTTGATAAGCTAGTTTACCTCCATGGAGCTGTATGTGAAGCCTTAAGGCTTTTTCCTCCTGTACCTTTTGAGCACAAGTGTGCAGTCAACCATGATACGCTCCCAAGTGGACACCATGTTAGTGCAAATATGAAGATATTGTACTTGTTGTATCCAATGGCAAGGATGGAACATATATGGGGAGATGACTGCTTGGAATTTAAGCCTGAGAGATGGATATCAGAGAGAGGGCGCATTATACACATGCCATCTTACAAGTTCATAACTTTCAATGCAGGGCCTAGAAGTTGTTTGGGAAAGGGCATTAGTTTCATTATGTTAAAGATGGTTGCAGCTGCTATAATACACCAATTTCGCATACATGTCATGGAAGATCATCCTATAACCCCGAGGCTTTCTATAGTTATGGGCATGAAATTTGGCTTGAAGGTCCAAGTTACTAAAAGATGCATTTGA 1503 0.4019 MTIIECIAVFAATLFFIFIHIWRRNRDVLLPNWPILGMLPAIWRNVSDFNDFATLVLKHNGGTAKFQGPWFTDTNFIFTSDSMNVNHITSKNFGNYGKGPNFHDIFEVLGNGIFNSDSHDWKQQRAMLHSIFQKKSYLIFIQQTIEKKVENCLLPILTQISIVGATVDLQDIFERFTFDISSTTVFGFDPHCLPSRFQELSEISCVKSLPIMEDAIFYRHITPTFIWKLQKWLQIGLERNFNVAQENLDQFVRQCIAYSKREDQQSEEEVEESDFYLLKAVMKEGSGKGEMSDEFLRDIAMNLLAGGDSVLAAGLSWHLWLVSTHPIVEGKIIQEIKDNCIIQEDNCHDLDKLVYLHGAVCEALRLFPPVPFEHKCAVNHDTLPSGHHVSANMKILYLLYPMARMEHIWGDDCLEFKPERWISERGRIIHMPSYKFITFNAGPRSCLGKGISFIMLKMVAAAIIHQFRIHVMEDHPITPRLSIVMGMKFGLKVQVTKRCI* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3911 500 SUPERFAMILY Cytochrome P450 31 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3911 500 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3911 500 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3911 500 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3911 500 Gene3D Cytochrome P450 18 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3911 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Lja1g3911 500 PANTHER CYTOCHROME P450 FAMILY PROTEIN 18 494 - -
Lja1g3911 500 Pfam Cytochrome P450 74 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3911 500 PANTHER CYTOCHROME P450 18 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3911 Lja-Chr1 49418432 49419934 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3911 1 498 Cytochrome P450 AT2G23180 41.165 3.05e-140 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3911 - - gmx:100793411 597.43