Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3909 ATGGCCATGATCGAATGCATTGCTGCATTTGCAGTCCTTCTCTTCTTCATTTTCATCCACATTTGGAGACGCAATCGAGGTGTTCTACTTCCAAATTGGCCAATACTTGGTATGCTACCAGCAATATGGCGTAATATGTCAGATTTCAATAATTTTGCAACTCTGATCTTGAAAGATAATGGAGGCACTGCAAGGTTTCAAGGACCATGGCTCACAGACACAAACTTTATCTTCACCAGCGATCCCATGAATGTCAACCACATCACAAGCAAGAATTTTGGCAACTACGGGAAAGGACCCAATTTCCATGACATCTTTGAAATTCTTGGAATTGGTATTATTAATTCAGATTCTCATGATTGGAAACAGCAGAGGGCAATGCTTCACTCAATGTTCCAAAAGAAAAGCTTTGAGATCTTGCTTCAACAAACCATTGAGAAGAAGGTGCAGAATTGCTTACTACCAATTCTAACTCAAATATCCAAAGTAGGAGCCACTGTAGACTTGCAAGATATCTTTGAGAGGTTCACCTTTGACACCACCAGCACCACTCTATTTGGATTTGATCCTCATTGCCTCCCTAGCAGGTTCGATGAGCTCTCAGAGATTGCTTGTGAAAAATCTTTGCCTATTCTGGAAGATGCAATATTCTTCAGGCACCTCACTCCAACATTTATATGGAAGCTGCAAAAATGGCTACAAATTGGTGTAGAGAGAAATTTCAATGTAGCTCAAAAAATTTTTGACCAATTCTTGCATCAATGTGTAGCGTATTCCAAACGTGAAGATCAGCAGAGTGAAGGAGTAGTGGAGGAATCAAATTTTCACTTGCTAAAATCTCTAATGAAGGAAGGAAGTGGAAATGGGAAAGTGATGAGAAATGGCACAATCGCTGCAGGTCTCAGTTGGCTATTCTGGCTTGTCTCAACTCATCCAATTGTGGAAGGTAAAATTATTCAAGAGATCAAAGATAATTGTCTAATCCAAGAAGGTAATTTTCTCGATCTTGATAAGCTAGTTTACCTCCATGGAGCTGTATGTGAAGCCTTGAGGCTTTTTCCTCCTATACCTTTTGAGCACAAGTGTGCCGTCAATCATGACACGCTCCCAAGTGGACACCAAGTTAGTGCAAATATGAAGATATTGTACTTGTTGTATCCAATGGCAAGGATGGAACATATATGGGGAGATGACTGCTTGGAATTTAAGCCTGAGAGATGGATATCTGATAATGGTCGCAATATACACATGCCATCTTACAAGTTCATAACTTTCAATGGAGGACCTAGAAGTTGTTTGGGAAAGGGCTTTAGTTTCATTATGTTGAAGATGGTTGCAGCTGCTATAATACCCAAATTTCACATACAAGTCATTGAAGGTCATCCTATAACCCCGAGGCTTTCTGTAGTTATGGGCATGAAATATGGATTGAAGGTCCAACTTACTAAAAGATGCATTTGA 1461 0.399 MAMIECIAAFAVLLFFIFIHIWRRNRGVLLPNWPILGMLPAIWRNMSDFNNFATLILKDNGGTARFQGPWLTDTNFIFTSDPMNVNHITSKNFGNYGKGPNFHDIFEILGIGIINSDSHDWKQQRAMLHSMFQKKSFEILLQQTIEKKVQNCLLPILTQISKVGATVDLQDIFERFTFDTTSTTLFGFDPHCLPSRFDELSEIACEKSLPILEDAIFFRHLTPTFIWKLQKWLQIGVERNFNVAQKIFDQFLHQCVAYSKREDQQSEGVVEESNFHLLKSLMKEGSGNGKVMRNGTIAAGLSWLFWLVSTHPIVEGKIIQEIKDNCLIQEGNFLDLDKLVYLHGAVCEALRLFPPIPFEHKCAVNHDTLPSGHQVSANMKILYLLYPMARMEHIWGDDCLEFKPERWISDNGRNIHMPSYKFITFNGGPRSCLGKGFSFIMLKMVAAAIIPKFHIQVIEGHPITPRLSVVMGMKYGLKVQLTKRCI* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3909 486 Gene3D Cytochrome P450 18 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3909 486 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3909 486 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3909 486 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3909 486 PRINTS P450 superfamily signature 310 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3909 486 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Lja1g3909 486 PANTHER CYTOCHROME P450 15 481 - -
Lja1g3909 486 Pfam Cytochrome P450 69 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3909 486 PANTHER CYTOCHROME P450 FAMILY PROTEIN 15 481 - -
Lja1g3909 486 SUPERFAMILY Cytochrome P450 31 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3909 Lja-Chr1 49390137 49391642 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3909 1 484 Cytochrome P450 AT2G23180 40.426 2.08e-134 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3909 - - lja:Lj0g3v0237839.1 636.336