Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3908 ATGGCCATGATAGAATGTTTTACAGTATTTGTAACCATTTTCTTCTTCATTTCCATCCACAATAGACGCAATAGAGATGTACTTCTCCCAAATTGGCCAATCATTGGTATGCTACCAGCAGTTTGGCGTAATGTGTCAGATATCCATGATTTTATAACTTTGGTCTTGAAACATCATGGAGGCACTCTAAGGTTTCAAGGACCATGGTTCACAGACACCAACTTTATCTTCACCAGCGATCCCGCGAATGTCAACCACATCACAAGCAAGAATTTTGGAAACTACGGGAAAGGCCCCAATTTCCATGACATCTTTGAAGTTCTTGGAAATGGTATTATTAATTCAGATTCTCATGATTGGAAACAGCAGAGGGCAATGCTTCACTCAATGTTCCAAAAGAAAAGCTTTGAGATCTTCCTTCAACAAACCATTGAGAAGAAGGTGGAGAATTGCCTACTACCAATTTTAACTCAAATATCCAAAGTAGGAGCCACTGTGGACTTACAAGATATCTTTGAGAGGTTCACCTTTGACACCACCAGCACCACTCTATTTGGATTTGATCCTCATTGCCTCCCTAGCAGGTTCCAAGAGCTCTCAGAGATTGCTTGTGAAAAATCTTTGCCTATTCTGGAAGATGCAATATTCTACAGGCACATCACTCCAACATTTATATGGAAGCTGCAAAAATGGCTGCAAATTGGTCTAGAGAGAAATTTCAATGTAGCCCAAAAAAATCTTGACCAATTCTTGCATCAATGTATAGCGTATTCCAAACGTGAAGATCAGCAGAGTGAAGGAGTAGTGGAGGAAACAGATTTTCACTTGTTAAAATCTCTAATCAAGGAAGGAAGTGGAAATGGGAAAGTGAGTGACAAGTTTCTAAGAGACACTGCTATTAACCTCTTGGCAGCAGGAAATGGCACACTCGCTGCAGGTCTAAGTTGGCTTTTTTGGCTTGTCTCAACTCATCCAATTGTGGAAGGTAAAATTATTCAAGAGATTAAAGATAATTGTCTAATCCAAGAAGATAATTGTCTCGACCTTGATAAGCTAGTTTACCTCCATGGAGCTGTCTGTGAAGCCTTGAGGCTTTTTACTCCTGTACCTTTTGAGCACAAGTATGTAATCAACCATGATACGCTCCCAAGTGGGCACCATGTTGGTCCAAATACGAAGATATTGTACATCTTGTATTCAATGGGAAGGATGGAACAAATATGGGGAGATGACTACTTGGAATTTAAGCCTGAGAGATGGATATCAGAGAAAGGGCACAGTATACACATGCCATCTAGTAAGTTCATAACTTTCAATGCAGGGCCTAGAAGTTGTTTGGGTAAAGGCATTACCTTCATTATGTTAAAGATGGTTGCAGCTGCTATAATACCCAAATTTCGCATACAAGTTATGGAAGATCATCCTATAACCCCAAGGCTTTCTGTAGTTATGGGTATGAGATATGGCTTGAAGGTTCAAGTTACTAAAAGATGCACATGA 1500 0.3987 MAMIECFTVFVTIFFFISIHNRRNRDVLLPNWPIIGMLPAVWRNVSDIHDFITLVLKHHGGTLRFQGPWFTDTNFIFTSDPANVNHITSKNFGNYGKGPNFHDIFEVLGNGIINSDSHDWKQQRAMLHSMFQKKSFEIFLQQTIEKKVENCLLPILTQISKVGATVDLQDIFERFTFDTTSTTLFGFDPHCLPSRFQELSEIACEKSLPILEDAIFYRHITPTFIWKLQKWLQIGLERNFNVAQKNLDQFLHQCIAYSKREDQQSEGVVEETDFHLLKSLIKEGSGNGKVSDKFLRDTAINLLAAGNGTLAAGLSWLFWLVSTHPIVEGKIIQEIKDNCLIQEDNCLDLDKLVYLHGAVCEALRLFTPVPFEHKYVINHDTLPSGHHVGPNTKILYILYSMGRMEQIWGDDYLEFKPERWISEKGHSIHMPSSKFITFNAGPRSCLGKGITFIMLKMVAAAIIPKFRIQVMEDHPITPRLSVVMGMRYGLKVQVTKRCT* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3908 499 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3908 499 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3908 499 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3908 499 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3908 499 PANTHER CYTOCHROME P450 FAMILY PROTEIN 15 493 - -
Lja1g3908 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Lja1g3908 499 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3908 499 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3908 499 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3908 499 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3908 499 Gene3D Cytochrome P450 20 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3908 499 PANTHER CYTOCHROME P450 15 493 - -
Lja1g3908 499 Pfam Cytochrome P450 30 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3908 499 SUPERFAMILY Cytochrome P450 29 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3908 Lja-Chr1 49377530 49379029 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3908 1 498 Cytochrome P450 AT4G39490 41.651 1.75e-143 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3908 - - gmx:100791312 625.165