Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3906 ATGCTACCAGCAGTTTGGCGTAATGTGTCAGATATCCATGATTTTATAACTTTGGTCTTGAAACATCATGGAGGCACTCTAAAGTTTCAAGGACCATGGCTCACAGACACCAACTTTATCTTGACCTGCGATCCCATGAATGTCACCCACATCACAAGCAAGAATTTTGGCAACTATGGGAAAGGCCCCAATTTCCATGACATCTTTGAATTTCTTGGAAATGGTATTATTAATTCAGATTCTCATGATTGGAAACAGCAGAGGGCAATGCTTCACTCAATGTTCCAAAAGAAAAACTTTGAGATCTTGCTTCAACAAACCATTGAGAAGAAGGTGGAGAATTGCTTACTGCCAATTCTAAATCAAGTATCCAAAGTAGGAGCCAATGTGGACTTACAAGATATCTTTGAGAGGTTCACCTTTGACACCACCAGCACCACTCTATTTGGATTTGATCCTCATTGCCTCCCTAGCAGGCTCCATGAGCTCTCAGAGATTGCTTGTGAAAAATCTTTGCCTATTATCGAAGATGCAATATTCTACAGGCACATCACTCCAACATTTATATGGAAGCTGCAAAAATGGCTGCAAATTCGTCTAGAGAGAAATTTCAATGTAGCCCAAGAAAATCTTGACCAATTCTTGCATCAATGTGTAGCGTATTCCAAACGTGAAGGTCAGCAAAGTGAAGGAGTGGAGGAATCAGATTGTCACTTGCTAAAATCTCTAATCAAGGAAGGAAGTGGTAATGGGAAAGTGAGTGACAAGTTTCTAAAAGACACTGCTATGAACCTCTTGGCAGCAGGAAATGGCACACTCGCTGCAGGTCTCAGTTGGCTCTTCTGGCTTGTCTCAACTCATCCAATTGTGGAAGGTAAAATTATTCAAGAAATTAAAGATAATTGTCTAATCCAAGAAGATAATTGTCTCGACCTTGATAAGCTAGTTTACCTCCATGGAGCTGTATGTGAACCCTTGAGGCTTTTTACTCCTGTACCTTTTGAGCACAAGTATGTAACCAACCATGATACGCTCCCAAGTGGGCACCATGTTGGTCCAAATACGAAGATATTGTACTTCTTGTATTCAATGGGAAGGATGAAACAAATATGGGGAGATGACTACTTGGAATTTAAGCCTGAGAGATGGATATCAGAGAAAGGGCGCAGTATACACATGCCATCTAATAAGTTCATAACTTTCAATGCAGGGTCTAGAAATTGTTTGGGTAAAGGCATGACTTTCATTATGTTAAAGATGGTTGCAGCTGCTATAATACCCAAATTTCGCATACAAGTTATGGAAGATCATCCTGTAACCCCGAGGCTTTCTATAGTTATGGGCATGAGATATGGCTTGAAGGTCCAAGTTACTAAAAGATGCACTTGA 1389 0.4039 MLPAVWRNVSDIHDFITLVLKHHGGTLKFQGPWLTDTNFILTCDPMNVTHITSKNFGNYGKGPNFHDIFEFLGNGIINSDSHDWKQQRAMLHSMFQKKNFEILLQQTIEKKVENCLLPILNQVSKVGANVDLQDIFERFTFDTTSTTLFGFDPHCLPSRLHELSEIACEKSLPIIEDAIFYRHITPTFIWKLQKWLQIRLERNFNVAQENLDQFLHQCVAYSKREGQQSEGVEESDCHLLKSLIKEGSGNGKVSDKFLKDTAMNLLAAGNGTLAAGLSWLFWLVSTHPIVEGKIIQEIKDNCLIQEDNCLDLDKLVYLHGAVCEPLRLFTPVPFEHKYVTNHDTLPSGHHVGPNTKILYFLYSMGRMKQIWGDDYLEFKPERWISEKGRSIHMPSNKFITFNAGSRNCLGKGMTFIMLKMVAAAIIPKFRIQVMEDHPVTPRLSIVMGMRYGLKVQVTKRCT* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3906 462 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 456 - -
Lja1g3906 462 Pfam Cytochrome P450 33 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3906 462 Gene3D Cytochrome P450 2 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3906 462 PANTHER CYTOCHROME P450 5 456 - -
Lja1g3906 462 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 401 410 IPR017972 GO:0005506|GO:0016705
Lja1g3906 462 PRINTS E-class P450 group I signature 257 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3906 462 PRINTS E-class P450 group I signature 277 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3906 462 PRINTS E-class P450 group I signature 398 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3906 462 PRINTS E-class P450 group I signature 408 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3906 462 SUPERFAMILY Cytochrome P450 6 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3906 Lja-Chr1 49359811 49361199 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3906 1 461 Cytochrome P450 AT4G39490 42.236 1.36e-131 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3906 - - gmx:100791312 575.089