Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3891 ATGTTCGCTTCAGAAAATGGGCTTAAAGGAGACCCAAGACTTCAAGCAATCACCAAAGCCATCACAGTTGTCCCTCACTTCCCCAAAAAGGGAATCATGTTTCAAGACATCACGACATTGTTGCTAGATCATAAGGCGTTTAAAGATACTATCGACATTTTTGTCGATCGTTACAGAGACATGCACATTTCTGTTGTGGCTGGCATTGAAGCCAGGGGATTCTTGTTTGGTCCCTCAATTGCATTGGGTATCGGTGCTAAGTTTGTTCCCCTGCGAAAACCTCGGAAGCTGCCAGGTGAGGTATTTTCTGAAAAATATTCTCTAGAATATGGCACTGATTGTTTGGAGCTGCATGTTGATGCTGTCCAGCCCGGTGAACGGGCCATAGTTATTGATGATTTGGTGGCCACAGGTGGAACTCTGTCAGCAGGAGTAAAACTTCTAGAACGTGCTCATGCGGAAGTAGTCGAATGTGCTTGTGTGATTGGTGTGCCTGATGTTAAGGGACAGTGCAGGCTCATTGGAAAGCCACTTTATGTCCTTGTGGAGCCCCGTCAAGTAGATAAATGTTTTTGA 576 0.4531 MFASENGLKGDPRLQAITKAITVVPHFPKKGIMFQDITTLLLDHKAFKDTIDIFVDRYRDMHISVVAGIEARGFLFGPSIALGIGAKFVPLRKPRKLPGEVFSEKYSLEYGTDCLELHVDAVQPGERAIVIDDLVATGGTLSAGVKLLERAHAEVVECACVIGVPDVKGQCRLIGKPLYVLVEPRQVDKCF* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3891 191 Gene3D - 5 184 IPR029057 -
Lja1g3891 191 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 1 188 - -
Lja1g3891 191 Pfam Phosphoribosyl transferase domain 43 165 IPR000836 -
Lja1g3891 191 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Lja1g3891 191 TIGRFAM apt: adenine phosphoribosyltransferase 18 182 IPR005764 GO:0003999|GO:0005737|GO:0006168
Lja1g3891 191 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5-LIKE ISOFORM X1 1 188 - -
Lja1g3891 191 CDD PRTases_typeI 51 183 IPR000836 -
Lja1g3891 191 SUPERFAMILY PRTase-like 20 176 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3891 Lja-Chr1 49062282 49065810 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3891 11 183 PRT Gene Family AT1G27450 68.208 1.05e-85 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3891 K00759 - gmx:100499904 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3891 1 49062282 49065810 Lja1g3891 1 49062282 49065810 ECH