Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3881 ATGAGTTCAAGTCTCTCTAACACTCCTCTTCACTCCTCAATCGCCACCGCTTCAGCCGCCGAAACCAATTTTCCCGCCAAATTCCAACGGCCAACGGCCAAGTTCCGCCCCGACAAGCCCAACGACCGTGCTTCTTCAGATGTCGCAGTTTCAAGCAGCAGAAGAGGGTTTATACGCATAGCCACGTTGCCATGTCTTCTTCCCCTGACTCAGATCATTGGTGTTCAACAAGCCAACGCGATTCAGCCTGATACAAAGGAATATCTTCTCATTAAAGAAGAGGTCAGGAAGGTTTTGTCGAAGGGAAAGGCGGCAGGCGTGCTTCGGTTGGTTTTCCATGATGCTGGAACCTTTGAAACTGCTGAAAAAACAGGTGGTATGAATGGTTCTGTACTCTATGAACTTGAAAGACCTGAAAATGCTGGGCTGAAAAAATCAATAAAGGTTCTGCAGAAGGCAAAGACTCAGATAGATGCTATCCAACCAGTATCCTGGGCGGACTTGATTGCTGTGGCTGGAGCTGAAGCAGTTGAAGTATGTGGAGGTCCAGCTATCCAAGTTTCACTGGGCAGACAAGATTCGCTGGGACCTGATCCTGAAGGGAAACTTCCTGAGGAATCTCTCAATGCTTCTGGTTTGAAGAAATGCTTTCATAGAAAAGGATTTACAACGCAAGAACTGGTAGCTTTGTCTGGAGCCCATACTATTGGAAGTAAAGGTTTTGGAGGCCCTACTTCTTTTGACAATTCGTATTATAAGGTTCTTTTGGAGAAGCCATGGGCGTCTTCAGGTGGTATGACAAGTATGATTGGCCTTCCTTCAGATCACGCTCTTGTTGAGGATGATGAATGCTTAAGATGGATTGCAAAATATGCAGAAAATGAGAATATGTTCTTTGAAGATTTCAAAAATGCATATGTAAAGCTGGTGAATTCTGGCGTGAGATGGAATAGCTTATAG 960 0.451 MSSSLSNTPLHSSIATASAAETNFPAKFQRPTAKFRPDKPNDRASSDVAVSSSRRGFIRIATLPCLLPLTQIIGVQQANAIQPDTKEYLLIKEEVRKVLSKGKAAGVLRLVFHDAGTFETAEKTGGMNGSVLYELERPENAGLKKSIKVLQKAKTQIDAIQPVSWADLIAVAGAEAVEVCGGPAIQVSLGRQDSLGPDPEGKLPEESLNASGLKKCFHRKGFTTQELVALSGAHTIGSKGFGGPTSFDNSYYKVLLEKPWASSGGMTSMIGLPSDHALVEDDECLRWIAKYAENENMFFEDFKNAYVKLVNSGVRWNSL* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3881 319 PRINTS Plant ascorbate peroxidase signature 104 119 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lja1g3881 319 PRINTS Plant ascorbate peroxidase signature 220 241 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lja1g3881 319 PRINTS Plant ascorbate peroxidase signature 181 193 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lja1g3881 319 PRINTS Plant ascorbate peroxidase signature 290 314 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lja1g3881 319 PRINTS Plant ascorbate peroxidase signature 122 132 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lja1g3881 319 PRINTS Plant ascorbate peroxidase signature 162 180 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lja1g3881 319 PRINTS Plant ascorbate peroxidase signature 202 219 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lja1g3881 319 MobiDBLite consensus disorder prediction 29 48 - -
Lja1g3881 319 Gene3D - 92 313 - -
Lja1g3881 319 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 37 316 IPR044831 GO:0004601|GO:0034599
Lja1g3881 319 ProSitePatterns Peroxidases active site signature. 104 115 IPR019794 GO:0004601
Lja1g3881 319 ProSiteProfiles Plant heme peroxidase family profile. 104 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3881 319 PRINTS Haem peroxidase superfamily signature 226 241 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3881 319 PRINTS Haem peroxidase superfamily signature 104 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3881 319 PRINTS Haem peroxidase superfamily signature 181 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3881 319 PRINTS Haem peroxidase superfamily signature 163 180 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3881 319 Gene3D Peroxidase, domain 2 204 306 - -
Lja1g3881 319 PANTHER L-ASCORBATE PEROXIDASE 6-RELATED 37 316 - -
Lja1g3881 319 Pfam Peroxidase 93 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3881 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 226 236 IPR019793 -
Lja1g3881 319 SUPERFAMILY Heme-dependent peroxidases 90 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3881 Lja-Chr1 48955320 48960533 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3881 55 317 Peroxidase AT5G47000 27.795 1.01e-22 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3881 K00434 - gmx:100792735 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3881 1 48955320 48960533 Lja1g3881 1 48955320 48960533 ECH