Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3866 ATGAGTGCAACAGTTCAGTGCTTATCCTGTGCTCGATTCCTTGCAGGAGGCCAATCTCTTCCATTACAACGGAAACCTCTCTTCTCCTCCGTCGTCATTTCTTCTCGGCCCCGAAACCTCTCTTCTTCCATCGTCGCCGCCGCTTCCAGAAAGAAGAAAAACAAGTCTCAGAATCAAGGTAAAGAGGGGGAAGAGGACGCGGTTGAGCTGCTCTTCAAGTTACTTGAAGAGGATCTCAAAAACGATGATTTGTCAATTGATGATGATGATGATGGTAGCTTTGATGACATTCCTGAAGAAGAATTGGCCTTGTTAGAAAGTGTGTTTGCTGATGCATTAGGAGATGATGATGATGATGATGGTGATGCTGAGCTGTTAAACTCAGATGCAATTGATGTAGAAACTGGTGATGATGAAGAAGCTGGTGATGATCCGGAAAATGACAATGAGGATGGAGATGAAAGCCCCCTGAAGCTTAGAACTTGGCAAATGAAGAAATTGGCTAGAGCTTTAAAAACTGGACGCCGTAAAACTAGTATAAAAAGTTTGGCTGCTGAGCTTTGTCTTGATAGGGCTCTTGTTCTTGAATTGCTCCGCAACCCTCCTCCAAATCTTCTAATGATGAGTCTATCAGTACCTGATGAACCCCCAGCGACCGTAGTTGAATCGAAACTCGGAGAGACTATTATTAATGAAACAAGTCTGGACAGTGGGGAATCTGAACCCAAGGCTCAAGTACCTATTCATACCATGCAGCGCAGTTGGTCTGCTCAAAAGAGATTGAAAAAAGCCCATGTTGACACTTTGGAGAGAGTTTATAGGAGATCGAAACGGCCCACTAATACAATGATCAGTAGTATTGTGCATGTAACAAACATTCCCAGAAGAAAAGTTGTTAAGTGGTTTGAAGACAAACGCGCCGAGGATGGAGTTCCTGATCGCCGTCTTCCTTACCAGCGTTCCACTGCCGAAGAAACTGCGTAA 984 0.4431 MSATVQCLSCARFLAGGQSLPLQRKPLFSSVVISSRPRNLSSSIVAAASRKKKNKSQNQGKEGEEDAVELLFKLLEEDLKNDDLSIDDDDDGSFDDIPEEELALLESVFADALGDDDDDDGDAELLNSDAIDVETGDDEEAGDDPENDNEDGDESPLKLRTWQMKKLARALKTGRRKTSIKSLAAELCLDRALVLELLRNPPPNLLMMSLSVPDEPPATVVESKLGETIINETSLDSGESEPKAQVPIHTMQRSWSAQKRLKKAHVDTLERVYRRSKRPTNTMISSIVHVTNIPRRKVVKWFEDKRAEDGVPDRRLPYQRSTAEETA* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3866 327 MobiDBLite consensus disorder prediction 116 159 - -
Lja1g3866 327 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 29 321 - -
Lja1g3866 327 CDD homeodomain 255 307 IPR001356 GO:0003677
Lja1g3866 327 PANTHER HOMEOBOX PROTEIN 8 29 321 - -
Lja1g3866 327 MobiDBLite consensus disorder prediction 116 151 - -
Lja1g3866 327 SUPERFAMILY Homeodomain-like 254 315 IPR009057 -
Lja1g3866 327 Gene3D - 254 314 - -
Lja1g3866 327 ProSiteProfiles 'Homeobox' domain profile. 252 312 IPR001356 GO:0003677
Lja1g3866 327 Pfam Homeodomain 260 307 IPR001356 GO:0003677
Lja1g3866 327 SMART HOX_1 251 316 IPR001356 GO:0003677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lja1g3866 Homeodomain 1.1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3866 - - lja:Lj0g3v0337679.1 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3866 1 48756445 48759370 Lja1g3866 1 48756445 48759370 ECH