Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3861 ATGTCGGCGTCTCGTATTTTTGACACCATGAATGAATGTCTGACCTTGATACAATCGGATTCCCCTGAAGCTCAGGAGAAAGGTCTTCAAACTCTGGCTGCAATAACCAAGGTCAGTCCTCAAAACAGAACCTGGGTTGCTCAAACAGAAGGAGTAATCCCAACATTAGCTACACTGACAAATGCTTCCTCCCCCATTCTCCAAACCCTTTCCTTGTTGATCCTCTTTAACCTTTCCCTCAATCCTGATCTAAAGCAATCCCTAGCAGACATGGACACAATTCACTACCTAAACTCCCTTATTACCTCATCAACTTCTCATGATTCCTGCAAATTAGCCTCCTCATTGGTTTGCAGCTTGGCCATGCTTGATAAAAACAAGGCCAAATTTGGGGTAGCGGGCACTGTTCAGTTGGTGGTGATGGCTATTAAGAAAATTGAAAGCTCTGTTGACTCTGAATCTGATATCCATCACCTTTTGAGTTCTTTGGCTGAGCTTGTTCTGTTCCACGGGAACTGCACTTTGGCTGTGAGAGCCGGGGCAGTTCCAGTGCTCCTTCAACTAGTTCAGGGAGCTGATAATGAGGACTTGGTTGGGACGTCTCTCACTGTTCTTGGTCTCCTTGCAAGGTTTGATGAAGGGTTGAATGCACTGAAGAAAACTAATCAGATAATTGGTTCAATGTTAAGTGTGTTGAAAGGGAGGTCCTTGTTGAATGCTAACATGGAAGCTAGCTCCTTGTACGTTTAG 750 0.4467 MSASRIFDTMNECLTLIQSDSPEAQEKGLQTLAAITKVSPQNRTWVAQTEGVIPTLATLTNASSPILQTLSLLILFNLSLNPDLKQSLADMDTIHYLNSLITSSTSHDSCKLASSLVCSLAMLDKNKAKFGVAGTVQLVVMAIKKIESSVDSESDIHHLLSSLAELVLFHGNCTLAVRAGAVPVLLQLVQGADNEDLVGTSLTVLGLLARFDEGLNALKKTNQIIGSMLSVLKGRSLLNANMEASSLYV* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3861 249 Gene3D - 4 241 IPR011989 -
Lja1g3861 249 SUPERFAMILY ARM repeat 5 215 IPR016024 -
Lja1g3861 249 PANTHER U BOX DOMAIN-CONTAINING 1 236 - -
Lja1g3861 249 PANTHER KINESIN-ASSOCIATED PROTEIN 1 236 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3861 17 222 U-box Gene Family AT1G23030 24.272 9.52e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3861 - - gmx:121174819 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3861 1 48727370 48728299 Lja1g3861 1 48727370 48728299 ECH