Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3852 ATGGAGTTCTGGTTCATCCTCATTGCCTTTCTCTGTTTTTGCATGCTCATCATAATGAGAGCTTTCCCCTCAAATATTCCTCTCCCTCCTGGACCTTTCCACCTTCCCATCATCTCCAACATCCTCTTGCTGCGAAAACCATTTTCAGAACTAGAGCCAATTCTTAGAAACCTCCATGCCAAACACGGTCCTATAATCACATTCAACTTCTGGAATGGTCCACACATTTTCATAGTTGATCCATCCATTGCCCACCAAGCCTTAATTCAGAAAGGTGCAATCTTCGCAGACCGCCCCAAAATCCTATGTAACAGTGACCAACTCAACATCTCCTCCTCCTCCTACGGCCCCACATGGCGTGTCCTCCGCCGTAACCTGGCCTCCGTGATGCTTCACCCGTCACGGTTGAAATCCTTTTCAAATACCCGCAAGCGGGTCTTAAATGATCTCCTGAATCAGTTGAAATATGATGCAGAATCATGTAATGCCATTAAAGTCATGGACCATTTGCAACATGCCATGTTCAGCTTGCTTGTTTTCATGTGTTTCGGTGAAAGAGTTGATGAGCATTACATCACACACATAAAAGGCATCCAGCGTCGTTTGATTTTAAACTCTAGCAGATTCACTATACTGAATTTCTTTCCAACACCGGTGGCTCGCGTCTTGTTCCGAAAACGCTGGCAGGAGTTTTGGCATCTTCGGAAGGCCCAAAAACATGTTTTGTCTGAATTAATAGAAGCAAGAAAACAAAATTTAGAAAGCAGGAAGAACAATGATATTGATAATGATGAATGTGCTGTTTGTTATGTGGATACTTTGTTAGATTTGCAATTGCCTGAGGAGAAACGCAAGCTGAATGAAGGTGAAATTGTTAATCTATGTTCAGAGTTTTTGAGTGCGGGCACAGATACAACTTCGACGACATTGGAGTGGGTTATGGCGAATATGGTGAAGAACACACATGAGCAACAAAGGGTTGTGGAGGAGATTGAAGGGGTTGTAGGTGGAAGAGGAAAAAGGGAAGTGACAGAAGAAGATGTGATGAAATTGCCATATCTGAAGGCTGTGATTTTAGAAGTTTTAAGGCTTCACCCTCCCACACACTTTGCAATTCCACATGGAGTAACAGAGGATGTGGTTTTGAATGGTTTCTTGGTGCCGAAGAAAGGGACGGTGAATTTTTTGCTGGCGGAGATGGGGTGGGATCCGAAGGTGTGGGAGGATCCTATGGCGTTCAAGCCAGAGAGATTTTCAAGAGGTGATCAGAAGGCATTGTTTGATATCAGTGGACGTAAAGAGATAAAGATTATGCCGTTTGGTGCAGGGAGGAGGATTTGTCCAGCTTATAACTTGGCAATGCTGCATTTGGAGTACTTTGTGGCAAATTTGGTCTGGAATTTTGAATGGAAGAAGACTTCACTTGATGTTGATCTGTCAGAAAAACAGGAGTTTACTATGGTCATAAAACATCCAGTGCAAGCTCTGGTTTCTCCTAGGTTCTAG 1506 0.4349 MEFWFILIAFLCFCMLIIMRAFPSNIPLPPGPFHLPIISNILLLRKPFSELEPILRNLHAKHGPIITFNFWNGPHIFIVDPSIAHQALIQKGAIFADRPKILCNSDQLNISSSSYGPTWRVLRRNLASVMLHPSRLKSFSNTRKRVLNDLLNQLKYDAESCNAIKVMDHLQHAMFSLLVFMCFGERVDEHYITHIKGIQRRLILNSSRFTILNFFPTPVARVLFRKRWQEFWHLRKAQKHVLSELIEARKQNLESRKNNDIDNDECAVCYVDTLLDLQLPEEKRKLNEGEIVNLCSEFLSAGTDTTSTTLEWVMANMVKNTHEQQRVVEEIEGVVGGRGKREVTEEDVMKLPYLKAVILEVLRLHPPTHFAIPHGVTEDVVLNGFLVPKKGTVNFLLAEMGWDPKVWEDPMAFKPERFSRGDQKALFDISGRKEIKIMPFGAGRRICPAYNLAMLHLEYFVANLVWNFEWKKTSLDVDLSEKQEFTMVIKHPVQALVSPRF* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3852 501 Pfam Cytochrome P450 29 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3852 501 PANTHER CYTOCHROME P450 5 499 - -
Lja1g3852 501 SUPERFAMILY Cytochrome P450 29 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3852 501 Gene3D Cytochrome P450 23 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3852 501 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3852 501 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3852 501 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3852 501 PRINTS E-class P450 group I signature 173 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3852 501 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3852 501 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3852 501 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3852 501 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3852 501 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3852 501 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3852 501 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3852 501 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3852 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Lja1g3852 501 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3852 Lja-Chr1 48668718 48670223 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3852 1 500 Cytochrome P450 AT1G64940 51.845 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3852 K24184 - gmx:100805244 590.497