Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3849 ATGGGAACGCCATTTCAGGGAATGATTCAAGATCTCAAAGGAAGAAGCCAATACTATAAACATGATTGGTCTTTTGCAGCCAGTTCTGGCCTTAGCATATTGGCTCCAACTTTCTACATATTCTTTGCTTCTGCTCTACCTGTTATTGCTTTTGGAGAGCAACTTAGTAGGGAAACAGATGGAAGCTTAAGCACAGTGGAAACATTGGCATCTACAGCCATTTGTGGAATTATCCACTCAATATTTGGTGGCCAGCCTTTGTTGATTTTAGGAGTTGCTGAACCAACTGTTATAATGTATACATATTTATTCAATTTCTGCAAAAACACTCCACAACTAGGTGCTAAGCTCTTTCTCGCTTGGGCTGGTTGGGTTTGTATTTGGACAGCGCTCTTGTTAGTTCTGCTTGCAATTTTTAATGCTTGCACAATTATCTCTAGGTTTACAAGAGTAGCATCTGAATTATTTGGCATGCTAATCACTGTTCTTTTCTTTCAAGAGGCTATAAAGGGACTGATTGCCGAGTTTAGAACACCCGAGAATGAAGATCCTTCAGCAAAGCAATTTCGATTCCAATGGCGGTACACGAATGGATTGCTAGCAATCATTTTTGCTTATGGACTACTTGTCACGGCCCTTAAAAGCAGAAAAGCAAGAACATGGAGATACGGAACAGGGTGGCTTCGAGGATTTGTTGCAGATTATGGGGCTCCATTAATGGTAGTATTCTGGACTGCAGTATCTTATATGCCACCAGACAGACTTCCAGAGGGTGTTCCTAGAAGGCTGTTATGTCCACTTCCCTGGGAACCTGCATCTCTGTATCACTGGACAGTAGTAAAGGATATGGGGAAGGTGCCCTTTGTGTATATATTGGCGGCAATTATCCCAGCTCTGATGATAGCAGGTTTATACTTTTTTGATCATAGCGTAGCTTCCAAGATGGCTCAGCAGAAAGAATTTAACCTTCAAAAGCCTTCTGCCTACCATTATGATATTTTCCTGCTTGGAATAATGACGTTGATTTGTGGTCTACTTGGCCTTCCCCCTTCAAATGGAGTCCTTCCACAGTCCCCTATGCATACAAAGAGTTTGGCAGTTCTTAGGAGGCGGTTAATGCGAAAGAGGGTGGTGAAAAGCGCCAAGGAATGTGTTAGGCTACAAAGGACCAGGTCTGAATTGTATGGAAAGATACAAGCTGTGTTTATAGAAATGGATGCAGCACCTACCGTTAAAGAAATGGAGACTTTGAAGAAAGCTGTTATGAAGCCTGATAGCAAGGATGGTGCAAAGGACAATCTTGATGTTGTGAAAAACATAGATGAATATATTCCTGTTAGGGTTAATGAGCAAAGAGTGACTAACTTAATGCAATCCCTTTTGGTTGGCGTATCAATGCTATCCATCTCTGTTATCAAAATGATACCTACCTCGGTTCTATGGGGATATTTTGCTTATATGGCAATTGATAGTCTCCCAGGGAATCAGTTCTGGGAGAGGATATTGCTCCTCTTCATCACCCCAAGCCGGCGTTACAAAATTTTGGAAGGTTCTCATGCCTCATTTGTGGAGAAACTACCATTCAAGACCATTGCTGCATTTACAGGCTTACAGTTAGCATATTTTCTGATCTGTTTCGGTGTGACATGGATACCTGTAGGTGGAATACTGTTTCCGCTACCGTTCTTCCTTCTCATCATTTTAAGAGAAAGATTACTTCCAAGGCTGTTCATACATAGCCATCTTCAGGAACTAGATGCTTCTGAGTACGAGGAAGCAATTGGTGCTCCACATGGTGACCATACTGTGCCACTTTTGGAGAAGGATAGTGATGGTGGTGAAAGCGAAGATGACTATGATGCTGAGATATTAGATGAGATGACAACCAACAGGGGAGAGTTGAAACTTAGAACTATAAGCTTCCACCGTAAACACCGTGGCGGCGGCGCCGGGGAAGACAGAAACTTTCAAGTAAGACTTCTTAGATTCATTTCTCATCCGAGAAGGAACGCAACACAAAAAAGGCTAAGTAGGAAAAAAAGGCTAACTAGGTGA 2055 0.4219 MGTPFQGMIQDLKGRSQYYKHDWSFAASSGLSILAPTFYIFFASALPVIAFGEQLSRETDGSLSTVETLASTAICGIIHSIFGGQPLLILGVAEPTVIMYTYLFNFCKNTPQLGAKLFLAWAGWVCIWTALLLVLLAIFNACTIISRFTRVASELFGMLITVLFFQEAIKGLIAEFRTPENEDPSAKQFRFQWRYTNGLLAIIFAYGLLVTALKSRKARTWRYGTGWLRGFVADYGAPLMVVFWTAVSYMPPDRLPEGVPRRLLCPLPWEPASLYHWTVVKDMGKVPFVYILAAIIPALMIAGLYFFDHSVASKMAQQKEFNLQKPSAYHYDIFLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLRRRLMRKRVVKSAKECVRLQRTRSELYGKIQAVFIEMDAAPTVKEMETLKKAVMKPDSKDGAKDNLDVVKNIDEYIPVRVNEQRVTNLMQSLLVGVSMLSISVIKMIPTSVLWGYFAYMAIDSLPGNQFWERILLLFITPSRRYKILEGSHASFVEKLPFKTIAAFTGLQLAYFLICFGVTWIPVGGILFPLPFFLLIILRERLLPRLFIHSHLQELDASEYEEAIGAPHGDHTVPLLEKDSDGGESEDDYDAEILDEMTTNRGELKLRTISFHRKHRGGGAGEDRNFQVRLLRFISHPRRNATQKRLSRKKRLTR* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3849 684 Pfam HCO3- transporter family 4 178 IPR011531 GO:0006820|GO:0016021
Lja1g3849 684 Pfam HCO3- transporter family 194 372 IPR011531 GO:0006820|GO:0016021
Lja1g3849 684 Pfam HCO3- transporter family 446 536 IPR011531 GO:0006820|GO:0016021
Lja1g3849 684 Gene3D Helical hairpin bin 15 57 - -
Lja1g3849 684 PANTHER BORON TRANSPORTER-LIKE PROTEIN 1 655 - -
Lja1g3849 684 MobiDBLite consensus disorder prediction 597 617 - -
Lja1g3849 684 PANTHER ANION EXCHANGE PROTEIN 1 655 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3849 Lja-Chr1 48624319 48635222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3849 4 645 Antiporters AT5G25430 65.077 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3849 K24194 - gmx:100792745 1014.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3849 1 48624319 48635222 Lja1g3849 1 48624319 48635222 ECH