Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3835 ATGGCGATGCTGAGAATGGCTCAGCCTCAACAGCATAACAATGACAGCAGTTTGAGCCAACAACACTTGGTCCTCCATGATTTTCTGGGCATGAAGCCCTCTGATGCTTCCCCTGATGTTAGGTTATCGGAGGTGACGCTTGCCGCCGCCGCCTCTTCCGCCGCTGCACGTGGTCCCTTTTCCTCCACCTCTGACACCGCTTCTGAAAAACAGGTAAGTAATCATCTCGAGGGAGTTCCGTACTATGGCCCGAGGGGTGATTTTTCTGGCACCGAGATAAGTAATAGACTGGTGGGAAACAAGAGAAGCAATTCCGATTCTACTTTTATGGGTTCCTCCAGAGATGCCTTCCAAATGGTCCCTGATTCCTTCCAAAACTCCCATTTGATGAAGGTTTTCCGGAATTCGGCTGGCGGAGATAAGTCTAGAAGGCCCAATGATGATGACGGGTTACTTGGTATGCCTTCACTGAAGCCATCTTCTGCTTCTCAGATATTTCAGCCTCCCACCAGCACCAGGATTGATGCTAGCAAATGGGAACGATCTATTCTCATGAACATTGGCTCTTCCGTGCAACATCCACTGCGTGGAGGGCAATTGACACCTTATGCACACCAAATGGCTTCAAACAGGATAAGGGATACCAATGCTGGTCCTTCCTATATCTCTCAGTCAGCTGCTGATGAAGGATCAAGAACTGGAATGAAGGGCCCTGGAATCTTAAGTTCTGTAAATACAACTGCTACTGCAGCCGAGAAAACTCCATCCACAGTGCTGCTTGGTGTAAGCAGGCCAAAGCCTCTACCTAATTTAATAGAATCATCGACACCTCCAAGTCAACATGGGCTGACATCTGCCAGCCGTCAGATGACTATTTTTTATGGAGGTCAAGCTCATGTTTTTGATGATGTCCACCCTCATAAGGCGGATGTTATAATGGCTTTGGCTGGGTCAAATGGTGGATCTTGGTCCACAGCGTTCTCGCCAAAATCTACTGTAAAGCTGGTTAATGATAGTAACTTACATAGTGGAGAAAATGAAACTGGTATGATAAGTAATGTGCCATTCCCACAGGAAATTCATGGGAAATTGTGTATTACCGGAAGTTCTAGCCATGCTGGGCTTGGTGATCGAGTATCTACACCAGCAGGGGCACACCAAGGAAGCATATTTGCTAAAGATACAAGAAATCCGGGTCAACCAGTGGATCACAGTTCTGAAGACAAAAGAGCACATTGA 1239 0.4705 MAMLRMAQPQQHNNDSSLSQQHLVLHDFLGMKPSDASPDVRLSEVTLAAAASSAAARGPFSSTSDTASEKQVSNHLEGVPYYGPRGDFSGTEISNRLVGNKRSNSDSTFMGSSRDAFQMVPDSFQNSHLMKVFRNSAGGDKSRRPNDDDGLLGMPSLKPSSASQIFQPPTSTRIDASKWERSILMNIGSSVQHPLRGGQLTPYAHQMASNRIRDTNAGPSYISQSAADEGSRTGMKGPGILSSVNTTATAAEKTPSTVLLGVSRPKPLPNLIESSTPPSQHGLTSASRQMTIFYGGQAHVFDDVHPHKADVIMALAGSNGGSWSTAFSPKSTVKLVNDSNLHSGENETGMISNVPFPQEIHGKLCITGSSSHAGLGDRVSTPAGAHQGSIFAKDTRNPGQPVDHSSEDKRAH* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3835 412 PANTHER PROTEIN TIFY 8 54 410 - -
Lja1g3835 412 SMART tify_2 283 318 IPR010399 -
Lja1g3835 412 Pfam tify domain 285 317 IPR010399 -
Lja1g3835 412 MobiDBLite consensus disorder prediction 56 73 - -
Lja1g3835 412 MobiDBLite consensus disorder prediction 53 73 - -
Lja1g3835 412 MobiDBLite consensus disorder prediction 135 169 - -
Lja1g3835 412 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 54 410 IPR040390 -
Lja1g3835 412 ProSiteProfiles Tify domain profile. 283 318 IPR010399 -
Lja1g3835 412 MobiDBLite consensus disorder prediction 376 412 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3835 20 316 Tify Gene Family AT4G32570 39.048 2.69e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lja1g3835 tify 2.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3835 - - gmx:100819293 628.632