Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3782 ATGACGGTGGAGCTCATGGGGTTCCCTCAAATGGACCAACAGAAGAAAGCAATTCAAGAGGCTGCAAACGAAGGCTTAAAAGGCATGGAGCATCTCATCAATCTCCTCTCTCACCAACCCTCTCATCTCCAAACAGATCTAACCGACGTAACCGTTTCCAACTTCAAAAAACTCATCTCCCTCCTCAACCGCACCGGCCACGCCCGCTTCCGCCGCGCACCTCTCCCCTCCACCCCCACTCCGCCACAACCTAATCCCATCGCCGTTCACCACCCTAAGCCCACCGTCGCACAATCCCTGACTCTCGACTTCACAAAACCCAACAACTTTTTGACCTCCAACGCTAAGTCGTTAGAGCTCGAATTCTCCAAGGAAACAACAACGTTTAGCGTCTCCTCCAACTCCTCCTTCCTCTCCTCTGCCATCACCGGCGATGGCAGCGTCTCCAACGGCAAACTAGGCTCCTCCATCTTCCTCACCCCGGCGGTCTCCGCCGGCGGGAAGCCTCCCCTCTCATCAACAACTCCGTCCAAGAAAAGGTGCCACGAGCACTCCGGCGATCCCTCCGGCTCCAACACCAAGTGCCACTGCACCAAGAGAAGGAAGAATCGGGTGAAGAAGACGATAAGGGTGCCGGCGGTGAGTTCGAAGGTGGCGGATATTCCGGCGGACGAGTACTCATGGAGGAAGTACGGTCAGAAACCGATCAAGGGCACACCATACCCACGTGGTTATTACAAGTGCAGCACCGTGAGAGGGTGTCCGGCGAGGAAACACGTGGAGCGGGCAACGGATGATCCGGCGATGCTGATTGTGACGTACGAGGATGAGCACGATCATGGGATTCAGACCGCGATGCATGATAACATTTCTGGTGCTGTGGGTTTCGTATACGAGTCAACGTAA 906 0.5541 MTVELMGFPQMDQQKKAIQEAANEGLKGMEHLINLLSHQPSHLQTDLTDVTVSNFKKLISLLNRTGHARFRRAPLPSTPTPPQPNPIAVHHPKPTVAQSLTLDFTKPNNFLTSNAKSLELEFSKETTTFSVSSNSSFLSSAITGDGSVSNGKLGSSIFLTPAVSAGGKPPLSSTTPSKKRCHEHSGDPSGSNTKCHCTKRRKNRVKKTIRVPAVSSKVADIPADEYSWRKYGQKPIKGTPYPRGYYKCSTVRGCPARKHVERATDDPAMLIVTYEDEHDHGIQTAMHDNISGAVGFVYEST* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3782 301 PANTHER WRKY PROTEIN 14 295 - -
Lja1g3782 301 Pfam WRKY DNA -binding domain 224 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja1g3782 301 MobiDBLite consensus disorder prediction 164 202 - -
Lja1g3782 301 SMART WRKY_cls 222 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja1g3782 301 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 295 IPR044810 GO:0003700
Lja1g3782 301 ProSiteProfiles WRKY domain profile. 217 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja1g3782 301 Pfam Plant zinc cluster domain 178 220 IPR018872 -
Lja1g3782 301 Gene3D WRKY domain 208 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja1g3782 301 SUPERFAMILY WRKY DNA-binding domain 220 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3782 Lja-Chr1 47527489 47529219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3782 1 300 WRKY Transcription Factor Family AT2G24570 55.589 4.90e-106 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lja1g3782 WRKY 5.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3782 - - gmx:100127394 429.483