Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3773 ATGTGGTTGCCAAAGAATCACTCAGACAAGAAGGATGGTGTGAATGGACAAGTAGCAGTGGCAATAGACAGAGATAAGGGGAGCCAAAATGCACTCAAATGGGCTGTTGATAATCTCCTCACAAGAAATTCAATTGTGATTCTCATCCATGTCAAGACTCAAACACCTTCTCTTTCTCCATCACCTTCTCTTTTCACCCCATGGAACAATTCATATAGTGGTGAGAATTTATCAGTATATAAAGAGCCTGATGCTCAGAACAAAAGCATTTTCCTTCCATCCCGTGTCTTCTGCACACGGAAAGATATACAATGCAAGGATGTCCTAATAGAAGATGTAGATGTATCCAAAGCTATAATTGAATATGCTGCTCATGCAGGAATTGAGCATCTGGTTCTTGGCTCTTCAACAAAAGCTGGTTTGCTTAAATTCAAGGTATCAGATATTCCAGGAACAGTAACAAAAGGGGCACCAGATTTTACTACAGTTTATGTTATTTCTAAAGGAAAGATTCAATCAATTCGATCTGCTTCTCGTCCTGCTCCAGCCATTGTCCCTCTCCAGGGTAGTCAAGTTAGTATCAGGCCAGACCCACCATCAGAATCAAATGTGTCATTGCCTCAAAAACAAGAAAAGTATTCCATTGATGCAACTCCACGCAGATCGCAGGATGGATTAGAAACATTCAGGTCACCACTCACTAGGAAAGGTTACAAAGGTAAACCATATGGGGAGACTTCCAAGGATTCAGACATATCCTTTGTGAGCTCTGGAAGACCAAGTACAGACCATTTGCTCTCTTCATTATCTAGCAACCCTGATACAGGGATGTCCCACTCCAGGCTCTCAAGTTTCTCAGACATGGACGGCAACTACAGCTTTGAGTCCATGTATCAGGGAAGGAAGTCTACAGAAATCAGCACTCCTCCTGAATTTTCATCACTCTCATTTGATAGTGACGGGCTTTCTACTTCTACAGCACAGGCTGTGGATGATATGGAGGCTGAAATGAGGAGATTGAAGTTGGAGCTAAAGCAAACAATGGAAATGTATAACACAGCCTGTAAAGAAGCACTCACAGCACAGCAAAAGGCAGTAGAACTTCAGCGCTGGAAATTAGAAGAAGAGAGGAGATTGGAAGAGGCAAGGATTGCCGAGGAAGCTGCATTGGCAATTGCAGAGAAGGAGAAAGCCAAATCTAGAGCAGCTATGGAGGCTGCAGAAGCACAAAGGAGGATTGCAGAACTGGAAGCAGAGAAGAGACTTAATGCAGAAATGAAAGCACTTAGAGAATCAGAGGAGAAAAAAAAAGTACTCGATGCTTTGGTAAATGTAGATGTCAGGTATAGAAGGTATCCAATCGAGGAGATTGAAGCTGCAACAGAATTTTTTGCAGAGTCCCGGAAGATTGGAGAAGGAGGATATGGTCCAGTTTTTAGTTGTCTTCTGGACCATACACCTGTTGCAGTCAAGGTTCTTCGTCCTGATGCAGCACAAGGAAGGTCACAGTTTCAACGAGAGGTCGAGGTACTTAGCTGCATAAGACATCCAAACATGGTTCTCCTCCTAGGAGCATGCCCAGAATATGGCTGCCTTGTGTACGAGTACATGGCTAATGGAAGCTTGGACGATCGCCTCTTTCACCGAGGGAACACACCCCCACTTTCTTGGCAGCAAAGGTTCAAAATTGCAGCTGAAATTGGCACTGGCTTGCTCTTCCTTCACCAGACAAAACCAGAGCCTCTGGTGCACAGGGACTTGAAACCAGCCAACATCTTGCTAGACAGAAACTTCGTGGCCAAGATCAGTGATGTGGGGTTGGCCAGGCTAGTCCCACCATCCGTGGCCGACACCGTGACGCAATATCGCATGACATCCACGGCAGGAACATTCTGCTACATAGATCCTGAGTACCAGCAAACAGGAATGCTAGGGGTGAAATCAGACATATATTCTCTTGGGGTCATTTTCCTTCAAATTTTGACAGCGAGACCACCAATGGGCTTGGCTCACAACACAGAAAGATCCATTGAGAATGGAACCTTTGCTGATTTGCTTGACCCTGCAGTGCCTGATTGGCCAGTAGAGGAGGCATTGAGCCTTGCAAAGATTGCAGTCCAATGTGCTGAGTTAAGGAGGAAAGACAGGCCTGATCTTGGCAAAGTTATTCTACCTGAACTCAACAGGCTAAGAGAACTTGCTGAGAATAGAGAACATTCAACGTTGGGTAACTCTATCAAGATCCATGAGAGACAAAGTAATTACATAATTGGATCAACTTCTCTTTTATCAGAATCGATTCTGAAACCTAGAAGGTACTCACAGAATTGA 2331 0.4432 MWLPKNHSDKKDGVNGQVAVAIDRDKGSQNALKWAVDNLLTRNSIVILIHVKTQTPSLSPSPSLFTPWNNSYSGENLSVYKEPDAQNKSIFLPSRVFCTRKDIQCKDVLIEDVDVSKAIIEYAAHAGIEHLVLGSSTKAGLLKFKVSDIPGTVTKGAPDFTTVYVISKGKIQSIRSASRPAPAIVPLQGSQVSIRPDPPSESNVSLPQKQEKYSIDATPRRSQDGLETFRSPLTRKGYKGKPYGETSKDSDISFVSSGRPSTDHLLSSLSSNPDTGMSHSRLSSFSDMDGNYSFESMYQGRKSTEISTPPEFSSLSFDSDGLSTSTAQAVDDMEAEMRRLKLELKQTMEMYNTACKEALTAQQKAVELQRWKLEEERRLEEARIAEEAALAIAEKEKAKSRAAMEAAEAQRRIAELEAEKRLNAEMKALRESEEKKKVLDALVNVDVRYRRYPIEEIEAATEFFAESRKIGEGGYGPVFSCLLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDRLFHRGNTPPLSWQQRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNFVAKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGVIFLQILTARPPMGLAHNTERSIENGTFADLLDPAVPDWPVEEALSLAKIAVQCAELRRKDRPDLGKVILPELNRLRELAENREHSTLGNSIKIHERQSNYIIGSTSLLSESILKPRRYSQN* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3773 776 Gene3D Transferase(Phosphotransferase) domain 1 537 754 - -
Lja1g3773 776 PANTHER OS02G0152300 PROTEIN 5 752 - -
Lja1g3773 776 CDD STK_N 18 169 - -
Lja1g3773 776 PANTHER UNIVERSAL STRESS FAMILY PROTEIN 5 752 - -
Lja1g3773 776 Gene3D HUPs 16 164 IPR014729 -
Lja1g3773 776 ProSiteProfiles Protein kinase domain profile. 464 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g3773 776 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 154 - -
Lja1g3773 776 Pfam Protein kinase domain 465 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g3773 776 MobiDBLite consensus disorder prediction 193 212 - -
Lja1g3773 776 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Lja1g3773 776 Coils Coil 356 436 - -
Lja1g3773 776 Coils Coil 330 350 - -
Lja1g3773 776 Gene3D Phosphorylase Kinase; domain 1 443 536 - -
Lja1g3773 776 SUPERFAMILY Protein kinase-like (PK-like) 447 722 IPR011009 -
Lja1g3773 776 SMART serkin_6 464 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g3773 776 MobiDBLite consensus disorder prediction 189 283 - -
Lja1g3773 776 Pfam Universal stress protein family 18 146 IPR006016 -
Lja1g3773 776 MobiDBLite consensus disorder prediction 249 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3773 Lja-Chr1 47372592 47378632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3773 1 735 Receptor kinase-like Gene Family AT1G78940 57.332 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lja1g3773 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3773 - - gmx:100803461 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3773 1 47372592 47378632 Lja1g3773 1 47372592 47378632 ECH