Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3763 ATGGATCCACCAAAGAGGCCTAACAAGATCAGAGAAATTGTCAGGCTTCAACAGATCCTTAAGAAATGGAGAAGGGTAGCCAACTCTTCAAAAACAACCAGAAGTAACAGCAGCAACCACAAAACCAGCTTTCTCAAAAGAACACTTTCTATATCTGATAGAGCAGAGGGAGGATCAAGCAACTTGGTTCCCAAAGGTTATCTAGCTGTTTGTGTTGGTGAGGATCTCAGCAGGTTTGTTATACCAACTGAGTATTTGGGTCATCAAGCCTTTCACATGTTGCTCAGAGAAGCTGAGGAAGAGTTTGGGTTTGAACAAACTGGTGTTTTGAGGATTCCTTGTGATGTTTATGTGTTTCAGAGTATTTTGAAGATAGTGGAAGGAAAGGACAGGTTTTCTACTCAGAAATGTAGGTTTAGCATTGAAAAGATGATGGGGTACTGTTCCTCAAACCATCTTGCAGCTTATTCTCATCAGCCTCAAAGTCCAATGTGCAGATAG 501 0.4132 MDPPKRPNKIREIVRLQQILKKWRRVANSSKTTRSNSSNHKTSFLKRTLSISDRAEGGSSNLVPKGYLAVCVGEDLSRFVIPTEYLGHQAFHMLLREAEEEFGFEQTGVLRIPCDVYVFQSILKIVEGKDRFSTQKCRFSIEKMMGYCSSNHLAAYSHQPQSPMCR* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3763 166 Pfam Auxin responsive protein 21 125 IPR003676 GO:0009733
Lja1g3763 166 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 166 IPR003676 GO:0009733
Lja1g3763 166 PANTHER OSJNBA0060N03.10 PROTEIN 6 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3763 Lja-Chr1 47255725 47256748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3763 5 166 Calmodulin-binding Proteins AT4G31320 50.521 2.07e-56 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3763 K14488 - aprc:113865930 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3763 1 47255725 47256748 Lja1g3763 1 47255725 47256748 ECH