Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3760 ATGGCTTCAAGTGAGACTGCAGATCTGAACGAGTTTCTCAACCTCGATTACGACCACCTCCGCTATCCCGACACCGCCGATGCATTATTCAACACCGTTTGCTCCGCCGCGTTCCACAACCTCCTCCCCGATGTGGTGAGTTCATTTTCAACTTGTGGTGGAGTAACAGTCACAGACACCCTTTACTCCCAAAAGCTCACTCCCAAATGTTCCACCGTGACTGCTACCAATGACTCTCAGTCATCAATTTGTGTTGGAAGTCCAGTGTCAGCTAATAAGCCAAACATGGGAGGAGAGAATCATCTGAAAGGAACTTCAAGTGGTTCCTCCGACCGGTCTGATGAGGATGATGATGAAGCAGGTCCCTGTGAACAAAGCAATAATCCACAAGATGTCAAGCGCCTTAGAAGGAAGGTTTCGAATCGTGAATCTGCGAGGAGATCAAGAAGAAGAAAACAAGCTCATTTGGCTGAACTTGAGACACAGGTTGAAAAACTGAAGCTGGAAAATGCAACCCTGTACAAGCAGTTCACAGATGCTAGTCAGCAATTTCGCGAGGCGGATACTAATAATCGAGTGCTCAAATCCGGTGTAGAAGCTCTGAGAGCTAAGGTGAAATTAGCTGAGGACATGGTGACTAGGAGCTCTTTCACCAATCAGATTCTTCAGAATCCATGTCAATTGAGCACCCCACCACAACTGAACTCTAATCTGAGAGGCATGGCACATGTTTCTCCAACCATCACTATCCATGGAGATAATGCCTCATATAATGGCATCAGAGTTGGTGAACAGAATTTTTCTACTCTTGGGTTTGGAAACTTGGATCACATGACCTACAACAACAACAACAATGTCAACAATATTGGAGTTATAAGTGATGCTATGAGCTGTGTTACCATGTGGCCATGA 912 0.455 MASSETADLNEFLNLDYDHLRYPDTADALFNTVCSAAFHNLLPDVVSSFSTCGGVTVTDTLYSQKLTPKCSTVTATNDSQSSICVGSPVSANKPNMGGENHLKGTSSGSSDRSDEDDDEAGPCEQSNNPQDVKRLRRKVSNRESARRSRRRKQAHLAELETQVEKLKLENATLYKQFTDASQQFREADTNNRVLKSGVEALRAKVKLAEDMVTRSSFTNQILQNPCQLSTPPQLNSNLRGMAHVSPTITIHGDNASYNGIRVGEQNFSTLGFGNLDHMTYNNNNNVNNIGVISDAMSCVTMWP* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3760 303 Coils Coil 142 176 - -
Lja1g3760 303 SUPERFAMILY Leucine zipper domain 133 183 IPR046347 GO:0003700|GO:0006355
Lja1g3760 303 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 131 194 IPR004827 GO:0003700|GO:0006355
Lja1g3760 303 MobiDBLite consensus disorder prediction 77 155 - -
Lja1g3760 303 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 136 151 IPR004827 GO:0003700|GO:0006355
Lja1g3760 303 SMART brlzneu 129 193 IPR004827 GO:0003700|GO:0006355
Lja1g3760 303 PANTHER BZIP TRANSCRIPTION FACTOR 1 303 - -
Lja1g3760 303 CDD bZIP_plant_GBF1 134 185 IPR045314 GO:0003700|GO:0006355
Lja1g3760 303 PANTHER BASIC LEUCINE ZIPPER 63 1 303 - -
Lja1g3760 303 Pfam bZIP transcription factor 132 177 IPR004827 GO:0003700|GO:0006355
Lja1g3760 303 Gene3D - 132 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3760 Lja-Chr1 47191502 47195949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3760 61 303 bZIP Transcription Factor Family AT5G24800 48.819 4.05e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja1g3760 bZIP_1 2.1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3760 K25784 - lja:Lj1g3v2035100.1 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3760 1 47191502 47195949 Lja1g3760 1 47191502 47195949 ECH