LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja1g3753	ATGGTACCTGTTGAAGCCAATCACATGGAGCGGGAACGAATTCGTAAACGACCTCGTCTCACCTGGGATGTTCCCCCTCCAGAGTCGCAGAGGGCTTTGGTGTTAGATGGTGACGAACGAATCGATAAGAAGCATGCCTCGCCTCCACGAAGGGATGATGACCGCGATGGCCATTATGTGTATCATCTCGGCGAAAATCTCACTCCTAGATATAAAATTCTCAGCAAGATGGGTGAAGGCACATTTGGTCGGGTTTTGGAATGTTGGGACCGTCAAACACGAGAGTATGTAGCTATCAAGGTAATTAGGAGCATACGGAAATATCGCGATGCGGCAATGCTTGAGATTGATGTGCTTGAACGTCTAACAAAGAAGGATGGAGCAAGCTCACGCTGTGTGCAGATCATAAATTGGTTTGATTACCGAAATCACATATGCATTGTCTTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTAAGGAGAAATAAATACTGCCCATTCCCTGTGGATCTTGTTCGTGAATTTGGACGACAGCTTTTGGAATCTGTAGCATGTCTGTGGATAATTCTAGACCTTCAGTTTACTTCTCATGTTTTATTCTTATATCTCTTGTGTACAATCAACCACATCATTTTCCTTGGCTGTCTTGCTTTGTCCAGGAACGCAGTATTTCTTCGTTTTGTCTGCTTACTTAAACTTGTTTCTTGTGCTTTGTCATATTCAGATATGCATGAACTACACCTAATCCACACAGACCTGAAGCCAGAAAATATACTTCTTGTTTCTTCTGAATATGTAAAGCTCCCTAGTCGCAAGAGGCTTTCCTCAGATGAAACACAATTCAGGTGCTTGCCCAAATCTAGTGCTATTAAGCTGATTGATTTTGGTAGTACTGCATGTGATAATCAGAACCATAGCTCCATTGTTTCTACAAGGCATTACAGAGCCCCGGAGATTATTTTAGGTCTAGGGTGGTCATACCCATGTGATTTGTGGAGTATTGGATGTATCCTCATTGAACTATGCACGGGTGAAGCGTTGTTCCAGACTCATGAAAACTTAGAGCATCTGGCAATGATGGAGAGAGTCCTGGGACCTCTACCAGAGCACATGGTTCGAAGATCTAATAGGGGTGCAGAAAAGTATTTCAAGCGTGGATCCCGACTAAAATGGCCTGAAGGAGCTGTTTCAAGGGAGAGCATAAATGCTGTGAAGAGGCTTGGCCATCTTAAGGATATTGTATCACGTCATGTAGATTCGTCCAGGTTTTTGTTAACTGACTTGTTGCATGGCTTATTAACATATGATCCCACAGAACGTCTAACTGCTCGCCAAGCCCTTGATCATCCCTTCTTTAGGGATCCAACTTAA	1374	0.4323	MVPVEANHMERERIRKRPRLTWDVPPPESQRALVLDGDERIDKKHASPPRRDDDRDGHYVYHLGENLTPRYKILSKMGEGTFGRVLECWDRQTREYVAIKVIRSIRKYRDAAMLEIDVLERLTKKDGASSRCVQIINWFDYRNHICIVFEKLGPSLFDFLRRNKYCPFPVDLVREFGRQLLESVACLWIILDLQFTSHVLFLYLLCTINHIIFLGCLALSRNAVFLRFVCLLKLVSCALSYSDMHELHLIHTDLKPENILLVSSEYVKLPSRKRLSSDETQFRCLPKSSAIKLIDFGSTACDNQNHSSIVSTRHYRAPEIILGLGWSYPCDLWSIGCILIELCTGEALFQTHENLEHLAMMERVLGPLPEHMVRRSNRGAEKYFKRGSRLKWPEGAVSRESINAVKRLGHLKDIVSRHVDSSRFLLTDLLHGLLTYDPTERLTARQALDHPFFRDPT*	458

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja1g3753	457	SUPERFAMILY	Protein kinase-like (PK-like)	59	455	IPR011009	-
	Lja1g3753	457	Gene3D	Transferase(Phosphotransferase) domain 1	240	453	-	-
	Lja1g3753	457	MobiDBLite	consensus disorder prediction	33	57	-	-
	Lja1g3753	457	PANTHER	BNAA07G37640D PROTEIN	45	187	-	-
	Lja1g3753	457	PANTHER	SERINE/THREONINE-PROTEIN KINASE DOA-RELATED	242	453	-	-
	Lja1g3753	457	SMART	serkin_6	71	453	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lja1g3753	457	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	249	261	IPR008271	GO:0004672\|GO:0006468
	Lja1g3753	457	Gene3D	Phosphorylase Kinase; domain 1	58	151	-	-
	Lja1g3753	457	PANTHER	SERINE/THREONINE-PROTEIN KINASE DOA-RELATED	45	187	-	-
	Lja1g3753	457	Gene3D	Transferase(Phosphotransferase) domain 1	125	187	-	-
	Lja1g3753	457	PANTHER	BNAA07G37640D PROTEIN	242	453	-	-
	Lja1g3753	457	Pfam	Protein kinase domain	71	187	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lja1g3753	457	Pfam	Protein kinase domain	235	453	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lja1g3753	457	ProSiteProfiles	Protein kinase domain profile.	71	453	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lja1g3753	457	MobiDBLite	consensus disorder prediction	15	57	-	-
	Lja1g3753	457	CDD	PKc_CLK	58	453	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja1g3753	Lja-Chr1	47142694	47146662	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja1g3753	55	453	EF-hand Containing Proteins	AT5G22840	27.332	3.27e-35	135

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_CLK	Lja1g3753		Pkinase	1.3e-30	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja1g3753	K08287		-	jre:108979624	682.945