Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3738 ATGAGCATTGCTGTTTTCGAAAATGGGGAGGACTACAGGCCAAATGAAGAATCTAATCTAGGCAATCCTAGTCAAGTATCGTGTTCAGAGCCATATTACATTTCTTTGGGTGATGTTTCTGCGTCCCTGCCAGACACAGCTTGCCAAGAGGATTACTCTGCTCAAATGATTGAGTACACACATGAACCTAGACATATCACAAATGGGGAAAACCAGCTTAGTTCACATGCCTTACCAAATATTTCCTCACTTGGCTTTGAGCATGAATCATCACAGGTGCAAAATGGTTGTATAGTTCCTAGTGAAAGTCATGACATGGTGAACGTTCCATTCCATTCTTCAGAGCACATGTTCATACCTGATGATGAATGTTGCAGAATCCTATTTTCTGAGGCAATGGGTGATTATAATAAAGGTGAAAACATGATTGACTCGAATGGTTGCGCTTCCCTTCATTCACCTTCATCAGGACCTTCTTCTTCTGGTGCTAGGTTGCTGTATACTGCAGAAGCGAATCAGTTGCTTGGGTCTGAGGATCAGCAGTTTATCTCCGAAGCACATGATAACTTAATTTATGCAAATGGCTTGAACAGCTCTCCTTGTATTGATAGAAATAGGATAGACAGTGCAGCAATGCAAGAGACACCAGGTATTGAGAATGATACTTCAAGTTTGGTCCCTGTAAATAGTTTTTGCCATGGATCAGATACTATTCAAACTTCAAATCCGAGAGATGAAGAGCCAAATGGGCACGCAGAACAGGAGGAAGCAGGTGCTCTGTGTTATGAACCTCCCCGTTTTCCAAGTTTGGACATTCCTTTCTTAAGCTGTGATCTTGTACAATCTGGGGGTGATATGCAGCAAGAATTTAGTCCCCTAGGTATCCGCCAGTTTATGATGTCTTCTATGAACTGTCTAACTCCTTTCAAATTGTGGGATTCACCTTCTCGCGATGATAGTCCAGATGCTTTGTTGAGAAGTGCTGCTAAAACTTTTACAGCTACACCATCTATATTGAAGAAACGAAGCCGGGACCTTTTGTCGCCATTATCTGATAAAAGAATTGACAAGAAACTTGAGGTTGACATGACATCTACCTTGATTAAAAACTTTTCCCGTTTGGATGTCATGTTTGTTGACAATGAAACTCAACACTTGCTTTCTCCAGCTTCAGTGGAAAAACTGAACTCTGGTACCTCTGTTGAAGATGACAGAGAAAATCACAGAGAAGCTATTAAAGTGGAACAAGTAGAGGAGAAAAATGAATCAGCAAATTTGGACGACAAAAAGTCAGAAGAAGATACTGATAAAAGTAATTCTGAGGATATGACTGAGCAGCGACCTCTTGATATTGATTCCAAGACAACAAATAATGTTAATATTGTTGCTGTGACTATGCCGCAGCCTTCAGGAATTTTGGTGGACCATGATACTAATGACCAACTGCTGCATTCTCCTCGAGGTGGTTCAAAGTCAGAGAGGGTTCAAAGTTCAAGTGCCCGAAAACAGAAAAATCCATGCACAAAGGTTAACTCTCCATGTATTAGAGCAAAGGAGCACGAAAGACTTTCAGTTGCTGTCACTTGTGTGCAATCCGTCTGTTCATCAGGCCCAGGGGAGAGTTCGGGTGATCATACTGCAAATGATGGAGCCTTTGAAACGTATAGCATATTTGCTGGAACACCTTTTAGGAAAAGCCTTGAATCACCTTCGGCATGGAAATCTCCTGCGGCTTGGAAATCTCCTTGGTTCGTCAATGCTTTTTTGTCTAGCCCCAGGCCTGGCACTGAACTTACGATTGAGGATTTTGGGTATTTGTTGAGCCCAGGTGATAGAAGCTACGATGCAATCGGACTGATGAAACAGGTCAGTGAACAAACCGCAGTTCAATATGCCAATGCTCATGAGATTTTGGAAAACCAAACTCATAAGGCGTTGTTACCAAGAGATGCATCTGGAAATGACCGGGATGAGGAACAGGAAAACAATGATCCTAATAATCAGCCTGTGGAGCGTCGCATACTTGACTTCAGCGAATGTGAAACTCCGGGCGATGATAAGAGCAAATCCTCAGGTGTGACATTCTCTAGCCCTTCTTCGTATTTGTTGAAGGGTTGTAGATAA 2124 0.4223 MSIAVFENGEDYRPNEESNLGNPSQVSCSEPYYISLGDVSASLPDTACQEDYSAQMIEYTHEPRHITNGENQLSSHALPNISSLGFEHESSQVQNGCIVPSESHDMVNVPFHSSEHMFIPDDECCRILFSEAMGDYNKGENMIDSNGCASLHSPSSGPSSSGARLLYTAEANQLLGSEDQQFISEAHDNLIYANGLNSSPCIDRNRIDSAAMQETPGIENDTSSLVPVNSFCHGSDTIQTSNPRDEEPNGHAEQEEAGALCYEPPRFPSLDIPFLSCDLVQSGGDMQQEFSPLGIRQFMMSSMNCLTPFKLWDSPSRDDSPDALLRSAAKTFTATPSILKKRSRDLLSPLSDKRIDKKLEVDMTSTLIKNFSRLDVMFVDNETQHLLSPASVEKLNSGTSVEDDRENHREAIKVEQVEEKNESANLDDKKSEEDTDKSNSEDMTEQRPLDIDSKTTNNVNIVAVTMPQPSGILVDHDTNDQLLHSPRGGSKSERVQSSSARKQKNPCTKVNSPCIRAKEHERLSVAVTCVQSVCSSGPGESSGDHTANDGAFETYSIFAGTPFRKSLESPSAWKSPAAWKSPWFVNAFLSSPRPGTELTIEDFGYLLSPGDRSYDAIGLMKQVSEQTAVQYANAHEILENQTHKALLPRDASGNDRDEEQENNDPNNQPVERRILDFSECETPGDDKSKSSGVTFSSPSSYLLKGCR* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3738 707 MobiDBLite consensus disorder prediction 1 24 - -
Lja1g3738 707 MobiDBLite consensus disorder prediction 640 707 - -
Lja1g3738 707 MobiDBLite consensus disorder prediction 649 666 - -
Lja1g3738 707 Coils Coil 414 434 - -
Lja1g3738 707 MobiDBLite consensus disorder prediction 687 701 - -
Lja1g3738 707 MobiDBLite consensus disorder prediction 470 509 - -
Lja1g3738 707 MobiDBLite consensus disorder prediction 483 509 - -
Lja1g3738 707 PANTHER TRANSCRIPTION REPRESSOR MYB5 60 706 - -
Lja1g3738 707 MobiDBLite consensus disorder prediction 411 454 - -
Lja1g3738 707 PANTHER MYB PROTEIN-RELATED 60 706 - -
Lja1g3738 707 MobiDBLite consensus disorder prediction 234 256 - -
Lja1g3738 707 MobiDBLite consensus disorder prediction 411 449 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3738 8 707 MYB Transcription Factor Family AT4G32730 35.077 1.46e-96 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3738 - K09420 lja:Lj1g3v2050890.2 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3738 1 46880055 46884111 Lja1g3738 1 46880055 46884111 ECH
Lja1g5669 1 100074377 100076314 Lja1g3738 1 46880055 46884111 PCT