Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3716 ATGGTCTCATCCTTAATGTTAGGAGCAGCTACTACAGCATTGTCACCTTCTACTTGTTCTACACTGTCATCATCATCATCATCATCATCACCATCACCATTACCACCACCACCACCACCATCATCATCATCACCATCATCATTATTTTCACGAAGATTTGCTGTAACTTGGTTCTCTGCAGCTTCATTTGGTTATTCAGCTCTGCCACAACCCCAGTTACTATTTGGTGCAAAAGGATTTCCATTTCAAGTACCAGAGGCTATTGCTGCTGCAGAAAAAAAGCTAGTCCCACCAGTGCCAAATTTGTTTGATTGGGTCCAAAATGACAAGCGAAGATTTCTCCATGTTGTGTACAAAGTTGGAGACTTAGAGAAGACTATAAAGTTCTACACTGAATGCCTTGGCATGAAGCTGTTGAGACAACGTGATATACCAGAAGATAGATATTCAAATGCTTTTCTTGGATATGGGCCTGAAGATTCCAGTTTTACAGTTGAACTTACCTACAATTATGGAGTGGATAACTATGACATTGGAGCTGGCTTTGGCCATTTTGGTATTGTAACTGAGGATGTTGCCAAGACAGTAGATCTAATAAAGGCAAAAGAGGGCAAGGTTACCAAGGAACCAGGGCCTTTCATTGAAGATCCTGATGGTTATAAGTTTAAGCTGTTGGAGAGAAAAGGACCTACTTCGGAACCCTTTAGCCAAGTGATGCTTCGAGTAGGTGATCTTGATCGTGCCATAGCCTTTTATCAAAAAGCTATTGGCATGAAACTTCTTTTCAAGGAAGATAACCCTGACCACAAGTACACAGTAGCCGTAATGGGCTATGGTTCTGAAGCTGATAATCCTGTTCTAGAACTGACATATAACTATGGCGTTACTAATTATGACAAAGGAAATGGTTATGCACAGATTGCAATAGGCACAAATGATATCTACAAGACTGCAGAAGCAATCAAATTGTCTGGAGGGAAGATTATCCGTGAACCTGGGCCCTTGCCAGGTATCAACACCAAGATCGTAGTTTGCTTGGACCCTGATGGTTGGAAATTGGTATTTGTTGATAATGTTGATTTTCTGAAGGAACTATAG 1098 0.4098 MVSSLMLGAATTALSPSTCSTLSSSSSSSSPSPLPPPPPPSSSSPSSLFSRRFAVTWFSAASFGYSALPQPQLLFGAKGFPFQVPEAIAAAEKKLVPPVPNLFDWVQNDKRRFLHVVYKVGDLEKTIKFYTECLGMKLLRQRDIPEDRYSNAFLGYGPEDSSFTVELTYNYGVDNYDIGAGFGHFGIVTEDVAKTVDLIKAKEGKVTKEPGPFIEDPDGYKFKLLERKGPTSEPFSQVMLRVGDLDRAIAFYQKAIGMKLLFKEDNPDHKYTVAVMGYGSEADNPVLELTYNYGVTNYDKGNGYAQIAIGTNDIYKTAEAIKLSGGKIIREPGPLPGINTKIVVCLDPDGWKLVFVDNVDFLKEL* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3716 365 Gene3D - 87 229 IPR029068 -
Lja1g3716 365 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 235 359 IPR029068 -
Lja1g3716 365 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 111 229 IPR029068 -
Lja1g3716 365 MobiDBLite consensus disorder prediction 12 45 - -
Lja1g3716 365 PANTHER LACTOYLGLUTATHIONE LYASE 99 365 - -
Lja1g3716 365 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 234 358 IPR037523 -
Lja1g3716 365 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 237 354 IPR004360 -
Lja1g3716 365 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 113 222 IPR004360 -
Lja1g3716 365 PANTHER LACTOYLGLUTATHIONE LYASE CHLOROPLASTIC-RELATED 99 365 - -
Lja1g3716 365 Gene3D - 231 365 IPR029068 -
Lja1g3716 365 TIGRFAM glyox_I: lactoylglutathione lyase 102 228 IPR004361 GO:0004462|GO:0046872
Lja1g3716 365 TIGRFAM glyox_I: lactoylglutathione lyase 235 359 IPR004361 GO:0004462|GO:0046872
Lja1g3716 365 MobiDBLite consensus disorder prediction 12 29 - -
Lja1g3716 365 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 112 237 IPR037523 -
Lja1g3716 365 MobiDBLite consensus disorder prediction 30 44 - -
Lja1g3716 365 ProSitePatterns Glyoxalase I signature 1. 115 136 IPR018146 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3716 Lja-Chr1 46495877 46498865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3716 236 357 Calmodulin-binding Proteins AT1G08110 24.490 1.74e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3716 K01759 - gmx:100810908 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3716 1 46495877 46498865 Lja1g3716 1 46495877 46498865 ECH