Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3704 ATGAAGTTCCACCACATTTCCTTGTTCCTTCTTTCAATCGCATTGGTGCTGAGCAACAGCTATGGTCTCCCTGTCCCAGGAAAAGTGCTCAATGTACCTCCTGAAGCATTGCTTTCCACTGGTCACTATCATACAACATGCCCAGCTGCTGAAGGCATTGTCTCACAAAAGGTTGCTGCTTGGGTTAAGAAGGATCCCACCCTGGCCCCTTCCATCATTCGCCTGCATTTCCATGACTGTGCCATCAGGGGATGTGATGCATCAATTTTGCTTAACCACAAAGGAAGTGAGAGGAATGCCTATGAGAGCAGAACACTGAGAGGTTTTCAGATGATTGATGACATCAAGGCTGAGATAGAAAGAAGGTGTCCAAGAACAGTTTCTTGTGCTGACATTCTCACTGCAGCTGCAAGAGATGCTACTATTCTAGCTGGAGGACCCTTCTGGGAAGTCCCATTTGGACGCAAAGATGGCAAGATTTCCTTAGCCAAAGAAGCCTCTCTGGTTCCTCAAGGCCATGAAAACATCACAGCATTGCTTCAATTTTTCCAAAAAAGAGGGCTAGACATGCTTGATTTGGTCACTCTCTCAGGCTCACACACAATTGGGAGGAGCACTTGCTCCTCTTTTGCTGACAGGCTTTACAACTTTAGTGGAACTGGAAAACCTGATCCCTCACTGAATGTCTATTACTTAAAATTGTTAAGGAAAAGGTGTCAAGGGGTGTTGGATTTGGTGCACCTTGATGTCATAACACCAAGGAAATTTGACACAACCTACTACACAAACCTTGTGAGGAAAGTGGGGCTGTTGTCAACAGATCAATCACTGTTTTCTGATGCAAGGACAGCTCCTTTTGTGGAAGCATTTGCAACACAGCCTTTCCTTTTTACTAGCCAGTTTGCTGTGTCAATGGTGAAGCTTGGGAATGTTCAAGTCATGACTAGGCCTAATGAAGGTGAAATCAGAGTGAATTGTAATTTTATCAATCGTGTCTAA 999 0.4454 MKFHHISLFLLSIALVLSNSYGLPVPGKVLNVPPEALLSTGHYHTTCPAAEGIVSQKVAAWVKKDPTLAPSIIRLHFHDCAIRGCDASILLNHKGSERNAYESRTLRGFQMIDDIKAEIERRCPRTVSCADILTAAARDATILAGGPFWEVPFGRKDGKISLAKEASLVPQGHENITALLQFFQKRGLDMLDLVTLSGSHTIGRSTCSSFADRLYNFSGTGKPDPSLNVYYLKLLRKRCQGVLDLVHLDVITPRKFDTTYYTNLVRKVGLLSTDQSLFSDARTAPFVEAFATQPFLFTSQFAVSMVKLGNVQVMTRPNEGEIRVNCNFINRV* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3704 332 ProSiteProfiles Plant heme peroxidase family profile. 37 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3704 332 PANTHER PEROXIDASE 25-RELATED 23 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3704 332 Pfam Peroxidase 54 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3704 332 PANTHER PEROXIDASE 23 329 - -
Lja1g3704 332 CDD secretory_peroxidase 38 329 IPR033905 GO:0004601|GO:0042744
Lja1g3704 332 Gene3D Peroxidase, domain 2 170 308 - -
Lja1g3704 332 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3704 332 PRINTS Haem peroxidase superfamily signature 69 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3704 332 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3704 332 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3704 332 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3704 332 SUPERFAMILY Heme-dependent peroxidases 38 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja1g3704 332 ProSitePatterns Peroxidases active site signature. 69 80 IPR019794 GO:0004601
Lja1g3704 332 Gene3D - 41 330 - -
Lja1g3704 332 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3704 332 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3704 332 PRINTS Plant peroxidase signature 71 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3704 332 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3704 332 PRINTS Plant peroxidase signature 47 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3704 332 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3704 332 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3704 332 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3704 332 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3704 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3704 Lja-Chr1 46337097 46339062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3704 33 330 Peroxidase AT1G30870 50.667 9.26e-108 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3704 K00430 - gmx:100792775 560.066