Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3691 ATGGCAAGAGGAAACTCAACATGTTCAAATTCAAAGTACCTCATGTTTTTGTGCATCTTCATGTTCATGCTCAACTTCCACTCATCCCATGGAGAACAACAAGAGCTCCAGCTTCTGTTATCCTTCAAAGCTTCCATCCACGACCCACTTCACTTCCTCTCCAACTGGGTCAGTTCCTCTGCCACTCCCTGCAACTGGCACGGCATCACCTGTGGCGACAATTCCTCCCACGTTACCGCCGTGGCACTCTCCGGAAAAAACATCACCGGCGAGGTTTTCTCTTCCATTTTTCAACTGCCACACGTCACGAGCATCGACCTCTCCAACAATCAACTTGTTGGGGAATTCAATCTTGACATCAACAACAACACTCCTTCTCTGTCCCCACTCCGTTACCTCAACCTCAGCAACAACAACCTCACGGGGACTCTGCCTCAGTCCTTGTTCTCTGCTTCGTTCTTCAACCTCGAAACTCTGGATCTCTGCAACAACATGTTTTCAGGGAAAATCCCAGACCAAATAGGAATCCTTTCCAGCTTAAGGTATCTTGACCTTGGAGGAAACGTTTTGGTGGGGAAGATTCCAAATTCCATCATCAATGTCACCACTTTACAGTACCTAACTTTGGCTTCAAACCAGTTAGTGGGTGAAATTCCTGCAGAGATAAGCCTAATGAAGAGCTTGAATTGGATTTACTTGGGGTACAACAATCTCTCAGGTGAGATACCAGGTAGCATTGGGGAACTATTAGCTTTAAACCACCTTGATCTTGTTTACAACAATCTCACAGGAACAATTCCTGAATCTCTTGGGAACCTCACTTCTCTTCAGTATCTCTTTCTCTATGCAAACAAGTTGACAGGTCCTATTCCTAAATCCATTTATGAGCTCAAAAAGCTTATCTCTCTTGACCTCAGTGATAACTTTCTTTCCGGTGAGGTTTCTGAGCTTGTGGTCCAGTTCCAGAGACTAGAAACCCTTCAACTTTTCTCAAACAACTTCACAGGAAGGATTCCAAAGGCTGTGGCATCTTTACCTCACCTTCAGATTCTTCAGCTTTGGTCAAACAACTTCACAGGTGAGATTCCAAAAGAGCTTGGAAAGCATAGCAACCTCACTGTTTTGGACCTGTCCTCCAATAACCTCACAGGGAATATCCCAGATGGGTTATGCAGCCATGGCAATCTCAACAAGCTTATCCTCTTCTCCAACTCTTTCCATGGAGAAATCCCACGTGGGATAAGCTCTTGTAGAAGCTTGCAACGAGTGAGAATCCAAAACAACAAGCTCTCAGGGGAATTGCCATCAGAAATGACAAAACTGCCTCAGATATACTTCTTGGATATCTCTGGCAATGAGCTTTCTGGAAGGGTTGATGACAGGGAATGGAACATGCCTTCCCTTCAAATGCTGAGTTTGGCAAACAACAAATTCTCAGGAGAGTTACCAAACTCTTTTGGAACTCAGAACCTTCAGGACCTGGATTTATCAGGGAACACTCTCTCAGGCCATTTATCAAACAGTTTCAGTGCATTAACAGAACTCATGCAATTGAAGCTTAGCAACAACAACCTCTCTGGTAACATCCCAGAAGAACTCTCTGAATGCAGCAAACTCATTTCTCTGGACCTCAGCCACAACCAACTCTCCGGTCAAATCCCAACAAAACTCGCCGCGATGCCGGTTCTCAGCCTCCTCGACTTATCGGAAAACGAACTCTCCGGTGAAATTCCACATAATTTAGGAAGCATTGAATCTCTTGTTCAGGTAAACATATCACACAACCATTTTCAGGGGAGTTTACCCTCCACCGGAGCTTTCCTTGCCATCAACGCAAGCGCTGTCGCCGGAAACCACCTCTGTTACCGCAACAGCGATGCTTCCAACGGTTTGCCGCCGTGCAAAGACAATCATCAGAACCAAACATGGCCGTTCGTCGTGCTGTGTTTTCTGCTCGGGTTGATTTCATTCGCCGCAACAGCTTCTCTCATCTACTTCGTGCGTTCCAGGAAGAAGAATTCACAGCTCAGAAGAGTGGAGAACGAAGATGGAACCTGGGAAATGCAGTTTTTCGATTCCAATGCATCGAAATTGATTGCAATCGACGATGTGTTGTCGTCGGTGAAAGAAGGGAAAGTGATTTCGAAGGGAAGGAACTGGGTTTCATACGAAGGGAAGTGCACGGAGAGTGACATGCAATTCACGGTGATTGAAATCGGCGACTCGAACTCACTTCCGGTGAGTTTCTGGGAGGAGGTGGTGAAGTTCGGGAAGCTCCGGCACCCGAACGTGGTTAACCTGATCGGAATGTGCAGGTCGGGGAAGAGAGGTTACTTGGTATACGAGCACGAGGAGGGGAAGAGCTTGAGCCAGATTGTGAACGGGTTGAGCTGGCAACGGCGGCGGAAAATCGCGGTGGCGGTGGCGAAAGCGCTGAAGTTCTTGCATTGTAACTGTTTTTTCGCCGGAGAGGTGTCGCCGGAGGTAGTTACGGTGGATAACAAGGGCGTCGCTCGCCTGAAGGTGAGACCTCCCAGAATAGCAAGCGTGGATGTCAAGGGTTTCATCTCTTCACCCTACGTTGCTCCAGAGGCAATAACGACAAAAGATGTGACTAAGAAGAGTGAGATATATGGCTTCGGAGTCATGCTGATCGAATTGTTGACAGGAAGAAGCCCTGTGGACATAGAAGCAGGGAATGGCGTGCGCAACAGCATCGTGGAGTGGGCTCGATACTGCTACTCCGACTGTCATCTTGACATGTGGATTGACCCAATGATGAAGGATGGAGATACATCGACCTATCAGAACGACGTTGTTGAGATCATGAACTTGGCTCTGCACTGCACCGCCACTGATCCCACCGCAAGGCCATGCGCGAGAGAAGTGCTCAAAACCCTAGAGACTATTCACAACAGCAACACACCAAGAAGTTTTTGCTGA 2943 0.474 MARGNSTCSNSKYLMFLCIFMFMLNFHSSHGEQQELQLLLSFKASIHDPLHFLSNWVSSSATPCNWHGITCGDNSSHVTAVALSGKNITGEVFSSIFQLPHVTSIDLSNNQLVGEFNLDINNNTPSLSPLRYLNLSNNNLTGTLPQSLFSASFFNLETLDLCNNMFSGKIPDQIGILSSLRYLDLGGNVLVGKIPNSIINVTTLQYLTLASNQLVGEIPAEISLMKSLNWIYLGYNNLSGEIPGSIGELLALNHLDLVYNNLTGTIPESLGNLTSLQYLFLYANKLTGPIPKSIYELKKLISLDLSDNFLSGEVSELVVQFQRLETLQLFSNNFTGRIPKAVASLPHLQILQLWSNNFTGEIPKELGKHSNLTVLDLSSNNLTGNIPDGLCSHGNLNKLILFSNSFHGEIPRGISSCRSLQRVRIQNNKLSGELPSEMTKLPQIYFLDISGNELSGRVDDREWNMPSLQMLSLANNKFSGELPNSFGTQNLQDLDLSGNTLSGHLSNSFSALTELMQLKLSNNNLSGNIPEELSECSKLISLDLSHNQLSGQIPTKLAAMPVLSLLDLSENELSGEIPHNLGSIESLVQVNISHNHFQGSLPSTGAFLAINASAVAGNHLCYRNSDASNGLPPCKDNHQNQTWPFVVLCFLLGLISFAATASLIYFVRSRKKNSQLRRVENEDGTWEMQFFDSNASKLIAIDDVLSSVKEGKVISKGRNWVSYEGKCTESDMQFTVIEIGDSNSLPVSFWEEVVKFGKLRHPNVVNLIGMCRSGKRGYLVYEHEEGKSLSQIVNGLSWQRRRKIAVAVAKALKFLHCNCFFAGEVSPEVVTVDNKGVARLKVRPPRIASVDVKGFISSPYVAPEAITTKDVTKKSEIYGFGVMLIELLTGRSPVDIEAGNGVRNSIVEWARYCYSDCHLDMWIDPMMKDGDTSTYQNDVVEIMNLALHCTATDPTARPCAREVLKTLETIHNSNTPRSFC* 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3691 980 Pfam Leucine Rich Repeat 130 148 IPR001611 GO:0005515
Lja1g3691 980 SUPERFAMILY L domain-like 319 622 - -
Lja1g3691 980 Pfam Leucine Rich repeat 369 384 IPR001611 GO:0005515
Lja1g3691 980 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Lja1g3691 980 Gene3D Transferase(Phosphotransferase) domain 1 784 978 - -
Lja1g3691 980 ProSiteProfiles Protein kinase domain profile. 708 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g3691 980 Gene3D Ribonuclease Inhibitor 194 246 IPR032675 -
Lja1g3691 980 Pfam Protein kinase domain 747 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g3691 980 PANTHER - 9 971 - -
Lja1g3691 980 Pfam Leucine rich repeat 490 549 IPR001611 GO:0005515
Lja1g3691 980 Pfam Leucine rich repeat 155 214 IPR001611 GO:0005515
Lja1g3691 980 Pfam Leucine rich repeat 252 308 IPR001611 GO:0005515
Lja1g3691 980 Gene3D Ribonuclease Inhibitor 247 317 IPR032675 -
Lja1g3691 980 PRINTS Leucine-rich repeat signature 539 552 - -
Lja1g3691 980 PRINTS Leucine-rich repeat signature 560 573 - -
Lja1g3691 980 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 9 971 - -
Lja1g3691 980 SUPERFAMILY Protein kinase-like (PK-like) 692 972 IPR011009 -
Lja1g3691 980 SUPERFAMILY L domain-like 46 384 - -
Lja1g3691 980 Gene3D Ribonuclease Inhibitor 32 193 IPR032675 -
Lja1g3691 980 ProSiteProfiles Leucine-rich repeat profile. 371 393 IPR001611 GO:0005515
Lja1g3691 980 Gene3D Phosphorylase Kinase; domain 1 670 783 - -
Lja1g3691 980 SMART LRR_typ_2 465 488 IPR003591 -
Lja1g3691 980 SMART LRR_typ_2 560 584 IPR003591 -
Lja1g3691 980 SMART LRR_typ_2 273 297 IPR003591 -
Lja1g3691 980 SMART LRR_typ_2 345 369 IPR003591 -
Lja1g3691 980 SMART LRR_typ_2 177 201 IPR003591 -
Lja1g3691 980 SMART LRR_typ_2 127 151 IPR003591 -
Lja1g3691 980 SMART LRR_typ_2 512 536 IPR003591 -
Lja1g3691 980 SMART LRR_typ_2 225 249 IPR003591 -
Lja1g3691 980 SMART LRR_typ_2 370 393 IPR003591 -
Lja1g3691 980 Gene3D Ribonuclease Inhibitor 318 629 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3691 Lja-Chr1 46208327 46212456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3691 13 968 Receptor kinase-like Gene Family AT2G25790 50.566 0.0 886
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Lja1g3691 Pkinase 1.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3691 - - gmx:100777118 1439.48