Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3674 ATGTCCAAAATACCCCTCCCCGTGCTGAAACTTCCACTCTATTTGTTCCTCTTGCTCGCCATCACGGTGCCCTTTCAAGTAATTTCGCAAGCAACAACCACCGAGGAAACAGTCCTACTCACCCTGAAACACCAACTGGGTGATCCACCGTCGCTCCAGTCATGGAAACAGTCACCATCCTCGCCGTGCGACTGGCCGGAGATTCTCTGCACCGCCGGCGCCGTCACGGAGCTCCTCCTCCCAAGCAAAAACATCACACAGACGAGTCTCCCAGCCACAATCTGCGACCTCAAAAACCTCACCAAGCTAGACCTCTCCAACAACTCCATCGCCGGCGAGTTCCCGACGTCGCTGTACAACTGCTCCAGCCTCCAGTACCTCGACCTCTCCCAGAACTACCTCGCCGGCGTGATCCCTGACGACATCAACCGCCTCAAAACCCTGACGTACCTCAACCTCGCCGGAAACAGCTTCACCGGCGACGTCCCAGCAGCGATCGGGAAACTCCCGGAGCTTCGAACTCTTCACCTGTATCAGAACAACTTCAACGGAACACTCCCGAAGGAGATTGGGGATTTGTCCAACCTTGAAACGCTGGGTTTGGCTTATAACTGGAGACTCACACCCATGGCGATACCCTTCGAGTTCGGGAACCTGAAGAACCTTCGTTTCATGTGGATGAAACAGTGTAACCTGATCGGGGAGATTCCCGAAAGCTTCGTGAATCTCACGAGCCTCGAACAGTTGGATTTGTCTGTGAACAATTTGACAGGAAGCATTCCTAGTTCTCTGTTTTCGTTCAAGAATCTCAAGTTTCTGTACCTGTTTCGTAATAGGTTGTCAGGGGTGATACCCAGTTCGGTGAAAGCGTTGAATTTGACTGATATAGATTTGGCTATGAACAATTTAACAGGTTCCATACCCCAAGAGTTTGGGAAGTTGAAGAATTTGACTATGTTGCACTTGTATTTGAATCAATTCTCTGGTGAGATTCCTAGTAGTTTAGGCTTAATCCCAAGTCTAAGGAACTTCAGGGTTTTTGGGAACAAGTTGAGTGGAACTTTGCCTCCAAAACTAGGCTTGTATTCAAACCTTGTATCTTTTGAAGTTTCTGACAATGAACTAGTTGGTGGGTTGCCAGAGAATTTGTGTGCTGGTGGTGTTTTGATGGGTTTGATTGCTTTTTCAAACAATCTCAGTGGGAACTTGCCTAGATGGCTTGAGGATTGTGCTTCTCTTACCACAGTTCAGCTTTACAATAACAAGTTTTCAGGGGAGGTTCCTTTGGGTTTGTGGAATTTGAGGAGACTGCAAACCTTGATGTTAAGCAACAACTCCTTTTCTGGGAAGCTTCCAAGTGAATTGTCTTCGAATGTTTCGAGACTTGAGATCAGAAACAACAACTTCTCAGGTCAGATATCTCTTGGAATTTCATCAGCTGTGAATTTAGTAGTTTTTGATGCAAGAAACAACATGATTTCGGGTGAAATTCCAAGGGAATTGACAAGTCTTTCAAAACTCACTACCCTCATGCTTGATGGTAATCAAATTTCTGGTCCACTTCCTTCAAAGATCATTTCATGGCAATCACTGAATACTATGTCCCTCTCAAGGAACAAGCTTTCTGGCCGAATCCCCGTAGCTATCGCGAGTCTTCCTAACCTTGTTTACTTGGACTTGTCTGAGAATGAAATCTCTGGTGTAATCCCAACTCAGGTTGCCAAATTGAGGTTTGTTTTTCTCAACTTGTCCTCCAACAACCTTTCTGGTAACATCCCTGATGAGTTTGATAACCTTGCATATGAAAGCAGTTTCTTGAACAATTCCCATCTATGTGCTCACAACCAAAGACTCAACCTTTCAAACTGCTTGGCCAAAACCTCACCACCCTCCAGCAATTCCTCTTCCAAATTCCTTTCCCTGATTCTCTCTGTCACCTCCATTGTGTTACTGATCCTTGCCTCCTTGGCCTTGTACACTTTGAAAAAGCAATGTGGCAAAAAGCAATTAAGGCCAAAGATATCAACATGGAGGCTTACCTCATTCCAGAGGTTTGATCTCACAGAAATAAATCTCTTCTCAAGTTTAACAGAAAACAACCTCATAGGAAGTGGAGGATTTGGGAAAGTCTACCGGATTGCTTCAGATCATTCCGGCGAGTATGTTGCGGTGAAAAAGCTTTGGAACAGCAAAGATGTCGATGACAAGCTGGAGAAAGAGTTTATGGCTGAGGTGGAGACCCTGGGCCACATTCGGCATTCCAATGTGGTGAAGCTTCTGTGTTGTTATTCAAGTGAGAACTCCAAGATTCTTGTTTATGAATACATGGAAAACCAGAGCCTGGACAAATGGCTTCATAGGAAGAAGAAAACATCATCAATTACTGAGTTGAGTTCACCCAACAAGAATCATCTGGTGTTGAGTTGGCCTACGAGATTGAAGATTGCCATCGGAGCTGCACAAGGTCTGTGTTATATGCACCACGAATGCTCACCGCGAATCATCCACAGAGATGTCAAGTCCAGTAATATACTGCTAGACTCAGAGTTCAAGGCTTGTATAGCAGATTTTGGGCTAGCTAAGATATTGACAAAGCCAGGGGAGCTACACTCCATGTCTGCTCTAGCAGGGTCTTTTGGCTACATTCCACCAGAATATGCTTACTCAACTAAGATTAACGAGAAGGTTGATGTATACAGCTTTGGAGTTGTACTTCTAGAGCTTGTAACGGGAAGAGAGCCTAACAACGCAGGCGAGCATGGAGGCAGCCTTGTTGATTGGGTATGGCAGCATTTCAGTGAAGGGAAGTGCCTTAGTGGTGCCTTTGATGAGGGTATCAAAGAAACACGTCATGCAGAAGAGATGACCACCGTCGTCAAATTAGGCCTGATGTGCACAAGTTCATTACCCTCAACTAGGCCTTCCATGAAGGAGGTTTTGCAAGTTCTTCGTCAGTCTTGTTCTCATGGTTCAGCTCATAAAAGAGTAGCAACTGAGTTTGACATCACCCCTCTTCTTGGGGATACGAGGTACATTACTAGTTATAAGGATAGCAGGGTGGTAAGTGAAAATGAAGATACCTGCTTGTATAGTGTGTGA 3099 0.4543 MSKIPLPVLKLPLYLFLLLAITVPFQVISQATTTEETVLLTLKHQLGDPPSLQSWKQSPSSPCDWPEILCTAGAVTELLLPSKNITQTSLPATICDLKNLTKLDLSNNSIAGEFPTSLYNCSSLQYLDLSQNYLAGVIPDDINRLKTLTYLNLAGNSFTGDVPAAIGKLPELRTLHLYQNNFNGTLPKEIGDLSNLETLGLAYNWRLTPMAIPFEFGNLKNLRFMWMKQCNLIGEIPESFVNLTSLEQLDLSVNNLTGSIPSSLFSFKNLKFLYLFRNRLSGVIPSSVKALNLTDIDLAMNNLTGSIPQEFGKLKNLTMLHLYLNQFSGEIPSSLGLIPSLRNFRVFGNKLSGTLPPKLGLYSNLVSFEVSDNELVGGLPENLCAGGVLMGLIAFSNNLSGNLPRWLEDCASLTTVQLYNNKFSGEVPLGLWNLRRLQTLMLSNNSFSGKLPSELSSNVSRLEIRNNNFSGQISLGISSAVNLVVFDARNNMISGEIPRELTSLSKLTTLMLDGNQISGPLPSKIISWQSLNTMSLSRNKLSGRIPVAIASLPNLVYLDLSENEISGVIPTQVAKLRFVFLNLSSNNLSGNIPDEFDNLAYESSFLNNSHLCAHNQRLNLSNCLAKTSPPSSNSSSKFLSLILSVTSIVLLILASLALYTLKKQCGKKQLRPKISTWRLTSFQRFDLTEINLFSSLTENNLIGSGGFGKVYRIASDHSGEYVAVKKLWNSKDVDDKLEKEFMAEVETLGHIRHSNVVKLLCCYSSENSKILVYEYMENQSLDKWLHRKKKTSSITELSSPNKNHLVLSWPTRLKIAIGAAQGLCYMHHECSPRIIHRDVKSSNILLDSEFKACIADFGLAKILTKPGELHSMSALAGSFGYIPPEYAYSTKINEKVDVYSFGVVLLELVTGREPNNAGEHGGSLVDWVWQHFSEGKCLSGAFDEGIKETRHAEEMTTVVKLGLMCTSSLPSTRPSMKEVLQVLRQSCSHGSAHKRVATEFDITPLLGDTRYITSYKDSRVVSENEDTCLYSV* 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3674 1032 SUPERFAMILY Protein kinase-like (PK-like) 690 983 IPR011009 -
Lja1g3674 1032 Gene3D Ribonuclease Inhibitor 32 186 IPR032675 -
Lja1g3674 1032 Gene3D Ribonuclease Inhibitor 187 289 IPR032675 -
Lja1g3674 1032 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 16 1000 - -
Lja1g3674 1032 ProSiteProfiles Protein kinase domain profile. 696 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g3674 1032 Gene3D Ribonuclease Inhibitor 290 388 IPR032675 -
Lja1g3674 1032 Pfam Leucine rich repeat N-terminal domain 35 70 IPR013210 -
Lja1g3674 1032 Gene3D Ribonuclease Inhibitor 389 628 IPR032675 -
Lja1g3674 1032 SMART LRR_typ_2 97 121 IPR003591 -
Lja1g3674 1032 SMART LRR_typ_2 434 458 IPR003591 -
Lja1g3674 1032 SMART LRR_typ_2 504 528 IPR003591 -
Lja1g3674 1032 SMART LRR_typ_2 552 575 IPR003591 -
Lja1g3674 1032 SMART LRR_typ_2 169 193 IPR003591 -
Lja1g3674 1032 SMART LRR_typ_2 243 267 IPR003591 -
Lja1g3674 1032 SMART LRR_typ_2 314 338 IPR003591 -
Lja1g3674 1032 Gene3D Transferase(Phosphotransferase) domain 1 776 1002 - -
Lja1g3674 1032 PANTHER KINASE FAMILY WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 16 1000 - -
Lja1g3674 1032 SMART serkin_6 696 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g3674 1032 ProSitePatterns Protein kinases ATP-binding region signature. 702 726 IPR017441 GO:0005524
Lja1g3674 1032 Pfam Leucine rich repeat 231 280 IPR001611 GO:0005515
Lja1g3674 1032 Pfam Leucine rich repeat 99 157 IPR001611 GO:0005515
Lja1g3674 1032 SUPERFAMILY L domain-like 42 379 - -
Lja1g3674 1032 Pfam Protein kinase domain 698 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g3674 1032 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Lja1g3674 1032 SUPERFAMILY RNI-like 290 624 - -
Lja1g3674 1032 PRINTS Leucine-rich repeat signature 243 256 - -
Lja1g3674 1032 PRINTS Leucine-rich repeat signature 124 137 - -
Lja1g3674 1032 Gene3D Phosphorylase Kinase; domain 1 679 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3674 Lja-Chr1 45854549 45858015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3674 22 1006 Receptor kinase-like Gene Family AT5G25930 55.870 0.0 1059
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lja1g3674 Pkinase 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3674 K00924 - adu:107461025 1434.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3674 1 45854549 45858015 Lja1g3674 1 45854549 45858015 ECH