Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3652 ATGCAGACGCTTAAGAAACTTCTCTCTGTGATCACTCTCTCTATTTTATTTATTGTTCTCTGTGATGTGTCTCTTGCAAGAAAGGTGAAGATGATGGAGAACCATAACCAGAAGAGTACTTACATAGTACATGCTGCCAAATCCCAAATGCCAAAAAGCTTCGGTCACCATTCAGCTTGGTTCGAATTGACTTTGAAGTCGGTATCAGACTCAGCAAAAATGATCTACACTTACGACAAAGCGATTTATGGATTCTCAACAAGGTTAACACCCGAGGAAGCCCATTTTTTGCAAAGCCGAAACGAGATTCTAAAGTCCAACATAGGATCTAGTGATGTCATCATTGGAGTCCTCGATACTGGCGTTTGGCCCGAGAGCAAGAGCTTCGACGACACCGGGAAATGCGAGGAAGGTACCAATTTCACACCCGCCAACTGCAACAAGAAATTGATCGGAGCCAGGTTCTACAAAAATGGCCTCGAGGCCTTGGTGGGCCCACTTGATGAATCCACAATTTCTCTCTCGTCGCGTGACGATGATGGCCACGGCAGCCACACTGCTAGTACTGCTGCAGGCTCTCCAGTGCAAAATGCGAGCCTCTTCGATTACGCTGCCGGAACAGCTCGTGGAATGGCCCCACGCGCTAGAGTCGCTGTCTACAAGGTTTGTTGGAATGATGGTTGTACTGTTTCTGACATATTGGCTGCGATCAACCAAGCTATCACCGACAACGTGAATGTCCTTTCCTTATCGATCGGAGGGGAAGTGCTCGATTATGATGCTGACAACCTCGCAATTGGAGCTTTTTCGGCAATGGAGCATGGAATTGTTGTGTCTTGCTCCGCCGGAAACACAGGTCCTGATCCTACTTCTCTCAACAATGTGGCACCTTGGCTTATCACTGTGGGAGCTGGCACACTTGATCGAGACTTCCCCGCATACGTTAGCCTTGGAAATGGACATAAATATTTTGGGGTGTCCCTTTACAATGGCAAGAAATTGCCTGATAAACGCATTCCGTTCATATACGCGGGGAACGTGAGCATAGAAGGAGTAACTGAAACGCGTCCCGAGTTTTGTATGGTAGGAAGCTTGTCGCCACAAAAAGTCAAGGGAAAGGTCGTGATGTGTGATCGTGGAAACAACCCTAGGGCGGAGAAAGCAGAGGTGGTGAAATCCGCAGGCGGTTTGGGAATGGTGTTGGCCAACAACCCGAATGAAGGGGAGGATTTGACATCGGATCCCTATGATTTTCCAGCAAACTTAGTGGGTGCGAAAGCCGGTGAAGCCATTAAGCAGTACTTGTTTTCTGATCCAAAACCGACAGCAACAATTGTGTTTGAGGGAACAAAAGTAGGGATCGAGCCGTCCCCTGTTGTGGCGGCATTCAGCTCTAGAGGCCCCAATTCTATCAGCCCAAATGTATTGAAGCCTGATTTGATTGCACCAGGCGTCAACATCTTAGCTGCATTTACCAGGAACGCAGGTCCCACTAATCTGGATTCGGATGAAAGGCGTGTTGATTTCAATATCATCTCTGGCACGTCCATGTCATGTCCTCACGTGAGTGGTATCGCAGCACTGATCAAGTCAGTTCATCCAGATTGGAGCCCAGCTGCCATTCGATCCGCGCTAATGACAACTGCATATTCGACTTACAAGAACGATATCCCATTGTTGGACAGTGCAACCGGAAAACCAGCAACGCCATTTGATTTCGGTGCAGGACACGTGGACCCCGTCCCTGCGCTTAATCCCGGGCTTATTTATGATTTGACGGCAGATGATTATCTGAATTTTCTATGTTCATTAAACTACACATCTGACAGAATTGAACTCGTGGCGAAGAGAAAATATCAGTGTGACGGAAAGGAACACTACTTTAACTACCCTTCATTTGCTGTGATTTTTAAAGCTGGTAACAATTTAGCGCAGGTTAAGCACATGAGGACTCTCACTAATGTGGGTGTCGCAGGAACGTACAAGGTATCAGTTAAGACAAATATCCCAGATCTCAAAATCATAGTTGAGCCAGAAGTTGTGAAGCCACATAAAACTCAAGGTTTTGGACGTTTAGAATGGTCTAATGGAAAGAACGTTGTTGGAAGTCCAATTGTATTCAGTTGGGAGTGA 2133 0.4674 MQTLKKLLSVITLSILFIVLCDVSLARKVKMMENHNQKSTYIVHAAKSQMPKSFGHHSAWFELTLKSVSDSAKMIYTYDKAIYGFSTRLTPEEAHFLQSRNEILKSNIGSSDVIIGVLDTGVWPESKSFDDTGKCEEGTNFTPANCNKKLIGARFYKNGLEALVGPLDESTISLSSRDDDGHGSHTASTAAGSPVQNASLFDYAAGTARGMAPRARVAVYKVCWNDGCTVSDILAAINQAITDNVNVLSLSIGGEVLDYDADNLAIGAFSAMEHGIVVSCSAGNTGPDPTSLNNVAPWLITVGAGTLDRDFPAYVSLGNGHKYFGVSLYNGKKLPDKRIPFIYAGNVSIEGVTETRPEFCMVGSLSPQKVKGKVVMCDRGNNPRAEKAEVVKSAGGLGMVLANNPNEGEDLTSDPYDFPANLVGAKAGEAIKQYLFSDPKPTATIVFEGTKVGIEPSPVVAAFSSRGPNSISPNVLKPDLIAPGVNILAAFTRNAGPTNLDSDERRVDFNIISGTSMSCPHVSGIAALIKSVHPDWSPAAIRSALMTTAYSTYKNDIPLLDSATGKPATPFDFGAGHVDPVPALNPGLIYDLTADDYLNFLCSLNYTSDRIELVAKRKYQCDGKEHYFNYPSFAVIFKAGNNLAQVKHMRTLTNVGVAGTYKVSVKTNIPDLKIIVEPEVVKPHKTQGFGRLEWSNGKNVVGSPIVFSWE* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3652 710 PRINTS Subtilisin serine protease family (S8) signature 110 129 IPR015500 -
Lja1g3652 710 PRINTS Subtilisin serine protease family (S8) signature 178 191 IPR015500 -
Lja1g3652 710 PRINTS Subtilisin serine protease family (S8) signature 513 529 IPR015500 -
Lja1g3652 710 ProSiteProfiles Serine proteases, subtilase domain profile. 94 584 - -
Lja1g3652 710 Pfam PA domain 358 431 IPR003137 -
Lja1g3652 710 Pfam Peptidase inhibitor I9 40 103 IPR010259 -
Lja1g3652 710 Gene3D - 308 453 - -
Lja1g3652 710 CDD PA_subtilisin_like 314 445 - -
Lja1g3652 710 ProSitePatterns Serine proteases, subtilase family, serine active site. 514 524 IPR023828 -
Lja1g3652 710 Gene3D - 601 709 - -
Lja1g3652 710 CDD Peptidases_S8_3 111 550 IPR034197 -
Lja1g3652 710 SUPERFAMILY PA domain 362 414 IPR046450 -
Lja1g3652 710 Gene3D Peptidase S8/S53 domain 112 597 IPR036852 GO:0004252|GO:0006508
Lja1g3652 710 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 106 IPR045051 -
Lja1g3652 710 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 28 106 - -
Lja1g3652 710 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 108 708 IPR045051 -
Lja1g3652 710 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 107 IPR037045 -
Lja1g3652 710 Pfam Subtilase family 110 576 IPR000209 GO:0006508|GO:0008236
Lja1g3652 710 SUPERFAMILY Subtilisin-like 104 588 IPR036852 GO:0004252|GO:0006508
Lja1g3652 710 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 108 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3652 Lja-Chr1 45515086 45517394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3652 9 709 Subtilisin-like Serine Gene Family AT5G67360 57.853 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3652 - - gmx:100801866 908.286