Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3651 ATGTCCACCGCCATAACTTCCCCGCGCCTCTTCCCTCTCCTCCACTTCCTCCTCCTCTCATCCCTCCTCACCACCGTCTTCTCCGACGAGCTTCAAATCCTCCTAAACCTCAAATCCACCCTTCAAAAATCAAACCCCAATCCCTTCACCTCATGGAACAACAACACCACCAACTCCCTATGCACCACCTTCCATGGCATCACCTGCAACTCCATGAACTCCGTCACAGAAATCAACCTCTCCAATCAAAACCTCTCCGGCGTCCTCCCTCTCAACTCCCTCTGCAACCTCCAATCACTCCAAAAACTTTCCCTCGGATTCAACAACTTCCATGGCAGAGTAACAGAGGATCTCAGAAACTGCGTCAAACTACACTACCTAGACCTCGGAAACAACCAATTCTCTGGCTCCTTCCCTGACATATCACCATTACACGAACTCCAGTACCTTTTTCTCAACAAGAGTGGCTTCTCTGGAACATTTCCATGGCAATCACTTCTCAACATGACGGGAATGTTGCAGTTGAGCGTAGGAGATAACCCTTTTGATCTCACTCCATTTCCGGTGGAAATTCTGAGCCTCAAGAACTTGAACTGGCTCTACCTGAGTAACTGCTCGCTCGGCGGGAAGTTACCGGTCGGAATCGGTAACCTCACCGAGCTAGCTGAGCTAGAATTCGCTGACAATTTCATCACCGGTGAGTTTCCGGCGGAGATAGTGAACCTCCGCAACCTCTGGCAGCTGGAATTCTACAACAACTCCTTCACCGGAAAGCTTCCAATCGGGCTGAGAAACTTGACAAAGCTTAAGTACTTCGATGGCTCCATGAATCGTCTCGAAGGAGATATCTCTGAGGTGAGGTATTTGAAAAACTTGATATCACTTCAGCTCTTTGAGAACAATTTCTCCGGCGAGATTCCACCGGAGATAGGCGAGTTCAAAAACCTCGTGGAGTTTTCTCTCTACAGGAACAGGTTAACCGGTCCAATTCCTCAGAAACTCGGTTCCTGGTCTGATTTCGATTACATCGACGTATCGGAGAATTTCTTGACTGGTTCAATTCCGCCGGAGATGTGTAAACAGGGGAAGATGACGGCGCTGCTCGTGCTTCAGAATAATCTCACCGGCGAGATTCCGGCGACTTATGGTGACTGTTTGAGCCTCCAAAGGTTCAGAGTAAGCAGAAACTCGCTCTCTGGAACAATCCCTCAAGCAATTTGGGGTCTTCCCGAAGCTGAATTGATCGATATTGAGCTGAACCAGTTGGAAGGTTCAATCAGTTCATACATTCAGAAAGCGAAAACACTCGCGAGTGTTTTCGCCAGAAACAACCGTTTATCCGGTGAAATCCCTGAAGAAATCTCAAAAGCGACGTCGTTGGTGGCCATTGATCTCAGCGAGAATCAAATTTCGGGGAAAATTCCAGAGCAAATCGGAAAACTCAAACACCTTGGTAAACTCCATTTACAGAGCAACAAGCTAACAGGGTCGATTCCAGAGTCTTTAGGCTCATGCACCTCCCTGAACGACGTTGATTTGTCCAGAAACTCGCTCAATGATAAAATCCCTTCATCTTTGGGTTCGTTACCGGCTCTGAACTCTCTGAATCTGTCAATGAATGAACTCTCCGGTGAAATTCCGGTGAGTTTAGCGTCGCTCCGGCTTAGCCTCTTTGATTTATCGTATAACAAGCTAAAGGGTCCAATTCCACAAGCTTTGACGATTCAAGCTTACAATGGAAGCCTCACCGGAAACCCTTCTCTCTGCACCGCCGTCGATGGAATTGGCATGTTCCGGCGATGCTCTGCTTCCTCTGTTATGTCCAAGGACCTTCGTGCGCTTCTGATATGTTTTTCAATTGCTCTGTTTTTGCTCCTCTGTTTTCTGGGTATCTACTTGAAGAGGAAGAATGAAGAGGGAGGAGAGAAAAAATATGGAAGAGAACGTTCTCTGAAGGAAGAATCGTGGGATGTGAAATCGTTCCATGTGTTAACCTTCACAGAGGGTGAGATTCTGGATTCTATTAAACAAGAGAATCTAATTGGGAAAGGAGGTTCAGGGAATGTATACAGAGTTGCACTCTCCAATGGGAAAGAACTAGCAGTGAAGCATATTTGGAACAATGCTGATTTCGCAGAGCGAAAAAGGTCGTGGAGTGGTACTCCGATGCTTGCAAAGCGCGCTGGAAAGACTCGTGAGTTTGAGGCGGAGGTTCAGGCGTTGAGCTCGATAAGGCATGTGAATGTGGTGAAGCTTTATTGTAGCATCACTAGTGAGGATTCGAGCCTGCTGGTGTATGAGTATATGCAGAATGGGAGTTTATGGGACAGGCTTCACACGAGTGGGAAGATGGAGCTTGATTGGGAGGCAAGGTATGAGATTGCGGTTGGTGCAGCAAAAGGGTTGGAGTATTTGCATCATGGGTGTCAGAGGCCTGTGATTCACAGGGATGTTAAGTCCAGTAACATTTTGTTGGATGAGTTCTTGAAGCCAAGGATTGCTGATTTTGGACTAGCTAAAATTGTTCAGCCCAATGTTGCCAAGGATTCTTCTACTCAGGTCATTGCTGGGACCCACGGCTACATCGCTCCAGAATATGGCTACACTTACAAAGTGAATGAGAAAAGTGATGTGTACAGCTTTGGAGTGGTCTTAATGGAGCTGGTAACTGGTAAAAGGCCAATTGAACCAGAATTTGGAGAAAACAAGGACATAGTGAGCTGGGTACATAGCAAGGCACAGAGCAAAGAGAAGTTCATGAGTGCAGTGGACTGCAGAATCCCAGAGATGTATAAGGAGGAAGCTTGCATGGTGTTAAGAACTGCAGTTCTCTGCACTGCAACACTTCCAGCTTTAAGACCCACCATGAGAGCTGTGGTTCAACAGCTTGAGGATGCTGAGCCTTGTAAATTGGTTGGAATTGTTATCAGCAAAGATGGAAGTGGAAAGAAAATAGAATTGAACGACAAATGA 2973 0.4675 MSTAITSPRLFPLLHFLLLSSLLTTVFSDELQILLNLKSTLQKSNPNPFTSWNNNTTNSLCTTFHGITCNSMNSVTEINLSNQNLSGVLPLNSLCNLQSLQKLSLGFNNFHGRVTEDLRNCVKLHYLDLGNNQFSGSFPDISPLHELQYLFLNKSGFSGTFPWQSLLNMTGMLQLSVGDNPFDLTPFPVEILSLKNLNWLYLSNCSLGGKLPVGIGNLTELAELEFADNFITGEFPAEIVNLRNLWQLEFYNNSFTGKLPIGLRNLTKLKYFDGSMNRLEGDISEVRYLKNLISLQLFENNFSGEIPPEIGEFKNLVEFSLYRNRLTGPIPQKLGSWSDFDYIDVSENFLTGSIPPEMCKQGKMTALLVLQNNLTGEIPATYGDCLSLQRFRVSRNSLSGTIPQAIWGLPEAELIDIELNQLEGSISSYIQKAKTLASVFARNNRLSGEIPEEISKATSLVAIDLSENQISGKIPEQIGKLKHLGKLHLQSNKLTGSIPESLGSCTSLNDVDLSRNSLNDKIPSSLGSLPALNSLNLSMNELSGEIPVSLASLRLSLFDLSYNKLKGPIPQALTIQAYNGSLTGNPSLCTAVDGIGMFRRCSASSVMSKDLRALLICFSIALFLLLCFLGIYLKRKNEEGGEKKYGRERSLKEESWDVKSFHVLTFTEGEILDSIKQENLIGKGGSGNVYRVALSNGKELAVKHIWNNADFAERKRSWSGTPMLAKRAGKTREFEAEVQALSSIRHVNVVKLYCSITSEDSSLLVYEYMQNGSLWDRLHTSGKMELDWEARYEIAVGAAKGLEYLHHGCQRPVIHRDVKSSNILLDEFLKPRIADFGLAKIVQPNVAKDSSTQVIAGTHGYIAPEYGYTYKVNEKSDVYSFGVVLMELVTGKRPIEPEFGENKDIVSWVHSKAQSKEKFMSAVDCRIPEMYKEEACMVLRTAVLCTATLPALRPTMRAVVQQLEDAEPCKLVGIVISKDGSGKKIELNDK* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3651 990 ProSiteProfiles Protein kinase domain profile. 675 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g3651 990 Pfam Leucine rich repeat 483 542 IPR001611 GO:0005515
Lja1g3651 990 SUPERFAMILY L domain-like 284 597 - -
Lja1g3651 990 Gene3D Transferase(Phosphotransferase) domain 1 769 972 - -
Lja1g3651 990 SMART serkin_6 675 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g3651 990 Pfam Leucine rich repeat N-terminal domain 29 70 IPR013210 -
Lja1g3651 990 Gene3D Ribonuclease Inhibitor 29 185 IPR032675 -
Lja1g3651 990 ProSitePatterns Protein kinases ATP-binding region signature. 681 703 IPR017441 GO:0005524
Lja1g3651 990 PANTHER RECEPTOR-LIKE PROTEIN KINASE HAIKU2 8 983 - -
Lja1g3651 990 Gene3D Ribonuclease Inhibitor 186 285 IPR032675 -
Lja1g3651 990 Gene3D Ribonuclease Inhibitor 474 594 IPR032675 -
Lja1g3651 990 ProSiteProfiles Leucine-rich repeat profile. 123 145 IPR001611 GO:0005515
Lja1g3651 990 SUPERFAMILY L domain-like 25 353 - -
Lja1g3651 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
Lja1g3651 990 Gene3D Phosphorylase Kinase; domain 1 659 768 - -
Lja1g3651 990 Gene3D Ribonuclease Inhibitor 286 473 IPR032675 -
Lja1g3651 990 SUPERFAMILY Protein kinase-like (PK-like) 665 963 IPR011009 -
Lja1g3651 990 PANTHER UNNAMED PRODUCT 8 983 - -
Lja1g3651 990 Pfam Protein kinase domain 677 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3651 Lja-Chr1 45495927 45499746 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3651 1 988 Receptor kinase-like Gene Family AT1G09970 59.192 0.0 1144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lja1g3651 Pkinase 8.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3651 - - gmx:100779554 1513.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3651 1 45495927 45499746 Lja1g3651 1 45495927 45499746 ECH