Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3650 ATGGCCAATCCCGACACCACTCACCGCCAACAACAACAACAACAACAACGCAACCGCCGCTCCAAACCCCGACCCAAGCCACGAGCCAGGGTCCCCCTCACTCAGCTCCTCAAAGTCGCATCAGTCGCCGGCGGCATTCAGTTCGGCTGGGCCCTACAGCTCTCCCTCCTCACACCCTACGTGCAGCAGCTCGGGATCCCGCACGCGTGGGCCAGCATCATATGGCTCTGCGGCCCGCTCTCTGGGCTCTTCGTTCAGCCCTTGGTTGGCCACATGAGTGACCGCTGCACCAACCGCTTCGGCCGCCGGAGACCGTTTATTGTGTCCGGAGCTTTGTTTATCATTGTCTCTGTTCTTATTATTGGTCACGCCGCTGACTTGGGGTGGAGGTTTGGTGATACTAAGACTCATCGGCCGGCCGCCGTGGCGTTTTTCGTGTTCGGGTTTTCGATTTTGGATGTGGCTAACAATGTCACTCAAGGTCCTTGTAGAGCTTTGCTTGGTGATCTCACTGGCAAGGATGACCGAAGGACACGTGTGGCGAATGCCTATTTCTCCCTATTTATGGCGATTGGTAATATTCTTGGATATGCAACTGGATCATACAGTGGTTGGTACAAGGTCTTTCCTTTCACGCTTACCCCTGCATGCAATGTTAGTTGTGCGAATCTCAAGTCTGCTTTCTTTCTCGACATTATTTTCATTGTGATCACCACCTATATCAGCACCGTATCAGCCCATGAAGTTCCTTTAAATTCAAGTGGTGCACACCCTGTTGAAGAAGGGGCAGGAGAGTCAGGTAGTGCAGAAGAAGCTTTCCTGTGGGAGATGTTTGGGACATTCAAATATTTTTCAAAACCTATATGGATAATATTGTCTGTTACTGCTCTAACATGGATTGGGTGGTTTCCATTTCTTCTATTTGATACTGATTGGATGGGCCGGGAGATTTATGGTGGTGAGCCAAATGAAGGCCCTAATTATGATATTGGAGTTAGAATGGGGGCACTTGGTTTAGTGCTTAATTCAGTTGTTCTTGGAATAACATCGCTACTCATGGAGAGGCTATGCAGGAACCGGGGGGCTGGGTTTGTGTGGGGAGTCTCAAATATCCTAATGGCTGTCTGCTTTGTTGCAATGCTTGTAGTAACCTATGTGGCAAACTATATTGGCTATGTAGGCAAACATTTACCACCAACTAGCATCGTGATAGCTTCATTGATGATCTTTACCATTCTTGGGTTTCCCCTGGCAATCACTTACAGTGTTCCTTATGCCTTAATATCCACGCATATTCAGCCATTGGGGCTTGGCCAAGGATTGTCAATGGGAATCCTAAATCTTGCAATAGTGTTCCCACAGATGGTGGTGTCTTTGGGAAGTGGACCATGGGATCAGCTATTTGGTGGAGGAAACTCTCCAGCCTTTGCTGTGGCAGCTGTTGCAGCCCTCATCAGTGGACTCATAGCTGTCTTGGCCATTCCTCGATCTGGTGGTCAAAGGCCTAGAAGCCAAGTATGA 1521 0.4918 MANPDTTHRQQQQQQQRNRRSKPRPKPRARVPLTQLLKVASVAGGIQFGWALQLSLLTPYVQQLGIPHAWASIIWLCGPLSGLFVQPLVGHMSDRCTNRFGRRRPFIVSGALFIIVSVLIIGHAADLGWRFGDTKTHRPAAVAFFVFGFSILDVANNVTQGPCRALLGDLTGKDDRRTRVANAYFSLFMAIGNILGYATGSYSGWYKVFPFTLTPACNVSCANLKSAFFLDIIFIVITTYISTVSAHEVPLNSSGAHPVEEGAGESGSAEEAFLWEMFGTFKYFSKPIWIILSVTALTWIGWFPFLLFDTDWMGREIYGGEPNEGPNYDIGVRMGALGLVLNSVVLGITSLLMERLCRNRGAGFVWGVSNILMAVCFVAMLVVTYVANYIGYVGKHLPPTSIVIASLMIFTILGFPLAITYSVPYALISTHIQPLGLGQGLSMGILNLAIVFPQMVVSLGSGPWDQLFGGGNSPAFAVAAVAALISGLIAVLAIPRSGGQRPRSQV* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3650 506 Gene3D MFS general substrate transporter like domains 35 493 IPR036259 -
Lja1g3650 506 Pfam MFS/sugar transport protein 51 197 - -
Lja1g3650 506 MobiDBLite consensus disorder prediction 1 28 - -
Lja1g3650 506 TIGRFAM GPH_sucrose: sucrose/H+ symporter 31 497 IPR005989 GO:0005887|GO:0008515|GO:0015770
Lja1g3650 506 PANTHER SUGAR TRANSPORTER 17 504 - -
Lja1g3650 506 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 17 504 - -
Lja1g3650 506 MobiDBLite consensus disorder prediction 1 18 - -
Lja1g3650 506 SUPERFAMILY MFS general substrate transporter 36 499 IPR036259 -
Lja1g3650 506 CDD MFS_SLC45_SUC 36 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3650 Lja-Chr1 45474926 45479985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3650 6 502 Sucrose Transporter Gene Family AT1G09960 66.929 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3650 K15378 - gmx:100787939 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3650 1 45474926 45479985 Lja1g3650 1 45474926 45479985 ECH