Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3615 ATGGATCTTGCTATGTTTCTTCTCATTGTTCTCACTCAAAGCTTTCTTCTATGCTCAAATGCAACTGCAAATCAGAATTACTCTGGGAATTCAATACTGAGGTGTAAAAATGACACCACAGATTTCCTCTACACCTGCAATGGCGTCCAAAAGTCCTGCATCGCCTTCCTCATTTTCAAATCCAAACCTCCTTACACCACCACCGCCACAATTTCCAACCTCACTTCATCAAACGCAGAAGAACTCGCCGGAATCAACACCGCCACAAATTTTCCCACTGGTAAAGAAGTAATTGTTCCTGTGAACTGTTCTTGTCAAACAAAAGACTACTATGAAGCTGAAACCAAATATGTTTTGCCACAAAAACCAACGTATTTCACAGTTGCTAACAACACCTATCAGGGGTTGTCCACTTGTGATTCTCTCATGCATGCAAATCCTTATGGGGTGCTTGATCTGCTTCCTGGCATGGAACTCAAAGTGCCACTCAAGTGTGCTTGTCCAACAAGGAATCAAATCATGAATGGCGTCAAGTATTTACTCACTTACCCAGTGAATTGGGGTGATAATATTTCTTATCTTGCACAACGGTTCAATCTTTCTGCAGATAGTCTAGTTGATGCCAATGGTTTTTCCTCTGAAACTGAAATTCTGTATCCATTCACAACTGTTCTGATTCCTTTGCCAACTGAACCCACCAATTCATTGACCATAGTTCATGAAGATCAACCACCCACTTCACCTTCTCTTGTTTCCATTGGAAAAAGCACAAATAGATTGAAACTTGTCGTTGCAGTAGCCACCACAGGGAGCTTCATGCTTGTTCTCTGTTTCATTCTAGTTACTCTTTTTCTACTCAGAAAGAGAAGAAGAGCAAGGTTCTTTAAGCGAGGCGCAAAAGGTAAAACCGTGCCAGATTCTTCAGAAGATCTTCGTGACGAGATTGCATGTATTGAGCTTCTCTCCAAAGTGTACAAGTTCGAGGAAATCAAGGAAGCGACAGAGAATTTCAGTTCAAAAAACAGAGTAAAAGGCTCTGTTTTTCGTGGCATGTTTGGTTCTGAGTCTAAAAAAGGCAATCTCACCTTGGCTATCAAGAGAATGAATTCAGATGCTTACAAGGAAGTGAATTTGCTGGGGAAAATCAATCATTTCAACGTGATAAACCTCAAAGGTTACTGTGAAAACGATGGCTTCTTCTATCTTGTTTTTGAGTACATGGAAAATGGCTCTTTAAGAGAATGGCTTGGGAAATCCATGTCCACAGAGCACAAAAGCTGGGTAAAGAGGGTTCAGATTGCTCTGGATATTGCAAATGGACTTGATTATCTTCACAATTTCACAGAGCCTTGCTATGTGCACAAGGATATTAGCACTGACAACATTCTGCAAAACAAAGATCTGAGGGCAAAAATAGCAAATTTTAATCTTGCTAAAGAATCAGAGAAGGATGTAACATCTGGTTCTCACACTTCACATGTTGTGGGAACCAGGGGTTATATGGCACCAGAGTATTTGGGGGCAGGGCTAGTCACTTCCAAAATGGATGTGTATGCTTTTGGAGTGGTGCTGTTGGAATTGGTCACAGGTAAAGCTTCTATTATTGAGCAAGATGGGAAAGAAGTGATGCTTTCAGCAATGATGGTTAATCTGATTGATAAAGATGATGATGATGCAGAAGAGAAACTTGGTTTGTTCATTGATCCTCGCCTCATTGGGAATAGTGGGAAAGTGTGTGGTGTTCAGCTAGTTAGAGTGAGCCTAGCATGCTTGATGGAAGAACCTGCAAGGAGACCAAACATGGCAGAGGTTGTCTCTAGCTTGTTGAAAATATATGCAGAAATGGACAGAGGAATATCACCAGGAACCTATGGCAGTCCAAGCATGGAGAGGTGA 1896 0.4135 MDLAMFLLIVLTQSFLLCSNATANQNYSGNSILRCKNDTTDFLYTCNGVQKSCIAFLIFKSKPPYTTTATISNLTSSNAEELAGINTATNFPTGKEVIVPVNCSCQTKDYYEAETKYVLPQKPTYFTVANNTYQGLSTCDSLMHANPYGVLDLLPGMELKVPLKCACPTRNQIMNGVKYLLTYPVNWGDNISYLAQRFNLSADSLVDANGFSSETEILYPFTTVLIPLPTEPTNSLTIVHEDQPPTSPSLVSIGKSTNRLKLVVAVATTGSFMLVLCFILVTLFLLRKRRRARFFKRGAKGKTVPDSSEDLRDEIACIELLSKVYKFEEIKEATENFSSKNRVKGSVFRGMFGSESKKGNLTLAIKRMNSDAYKEVNLLGKINHFNVINLKGYCENDGFFYLVFEYMENGSLREWLGKSMSTEHKSWVKRVQIALDIANGLDYLHNFTEPCYVHKDISTDNILQNKDLRAKIANFNLAKESEKDVTSGSHTSHVVGTRGYMAPEYLGAGLVTSKMDVYAFGVVLLELVTGKASIIEQDGKEVMLSAMMVNLIDKDDDDAEEKLGLFIDPRLIGNSGKVCGVQLVRVSLACLMEEPARRPNMAEVVSSLLKIYAEMDRGISPGTYGSPSMER* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3615 631 ProSiteProfiles LysM domain profile. 181 226 IPR018392 -
Lja1g3615 631 ProSiteProfiles Protein kinase domain profile. 289 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g3615 631 SUPERFAMILY LysM domain 181 227 IPR036779 -
Lja1g3615 631 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 10 618 - -
Lja1g3615 631 Gene3D LysM domain 180 227 IPR036779 -
Lja1g3615 631 Gene3D Transferase(Phosphotransferase) domain 1 407 620 - -
Lja1g3615 631 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 10 618 - -
Lja1g3615 631 Gene3D Phosphorylase Kinase; domain 1 302 406 - -
Lja1g3615 631 Pfam LysM domain 185 227 IPR018392 -
Lja1g3615 631 Pfam Protein tyrosine and serine/threonine kinase 345 608 IPR001245 GO:0004672|GO:0006468
Lja1g3615 631 SUPERFAMILY Protein kinase-like (PK-like) 322 608 IPR011009 -
Lja1g3615 631 CDD LysM 182 226 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3615 Lja-Chr1 44845175 44847371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3615 1 613 Receptor kinase-like Gene Family AT2G23770 37.697 1.62e-121 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lja1g3615 PK_Tyr_Ser-Thr 2.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3615 - - gmx:100806221 764.607