Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3611 ATGGAGCTAATGTTTTGGTGCACGCTGTCCGGATTTCATTGCAAGCTTCGATTTGCCTTAATTGTTCTTGAGATTTTATTGGTTTTGGCATTGGTGAAAGCTCACATTGCAACGCCCTACGGAGGCCAACTTCAACGGGTAGGGTTGGAAAGGAATAGTGAGAATATTGTCTCACACTCTTGCATCCATGACCAGATTATTGAACATAGGAAGCGACCTGGTCGCAAGGTGTATTCAATTACCCCGCAGGCTTATGAGCCTGGTCTCTTGAAGCCCCTTCAACCTAAAGGCAGGGCATTACTTGAAGCGTCGACATCATCAGGGCCTCAAAAGGATTCAAAGGAACCTATTAGGATATATCTAAATTATGATGCTGTTGGCCACTCTACTGAAAGAGATTGTAAAAAAGTTGGTGATATTGTCAAACTGGGAGAGCCTCCCATGACTTCTCTTCATGGTTCCCCTTCTTGTGATCCTCATGGTAACCCCCCAATCTTAGGTGATTGTTGGTATAACTGCACTTTTGAAGATATCTCAAGAGAGGATAAAGAGAATCGCCTTCGTAAGGCATTAGGTCAGACTGCTGGCTGGTTTAGGCAAGCATTGGCTGTAGAGCCTGTCAAGGGGAACTTGCGGTTAAGTGGGTATTCTGCATGTGGACAAGATGGAGGCGTGCAGCTTCCTCGTGCATATATTGAGGAGGGTGTCTCTGATGCGGACTTGGTTCTTTTGGTGACTACAAGACCCACAACTGGAAATACACTCGCTTGGGCAGTGGCATGTGAACGGGATCAATGGGGCCGTGCTATAGCTGGACATGTTAATGTTGCTCCTCGCCATTTGACTGCTGAGGCAGAGACTTTGCTTTCAGCTACTCTGATACACGAGGTTATGCATGTTCTTGGTTTTGACCCACATGCCTTTGCTCATTTTAGAGATGAAAGGAAAAGACGTCGAAATCAGGTTACTGAACAAGTAATGGATGACAAGCTTGGACGGATGGTGAATCGTGTGGTGCTTCCTCGTGTTGTCATGCATTCACGATATCATTATTCGGCGTTCTCTAGAAATTTTACTGGTTTAGAGCTTGAAGATGGTGGAGGACGTGGCACCTCAGGGTCTCACTGGGAAAAAAGGCTTCTGATGAATGAGATTATGACTGGTTCTGTTGATACAAGATCTGTAGTGTCAAAAATGACACTAGCTCTTTTAGAAGATAGTGGATGGTACAAAGCCAATTATAGCATGGCAGACCATCTTGATTGGGGTCGCAACCAAGGTTCGGAATTTGTTACGTCCCCTTGCAATCTCTGGAAGGGAGCCTATCACTGCAACACAACACAGTTTTCTGGCTGCACGTATAACAGGGAGGCAGAGGGATACTGCCCAATCCTAACATATAGTGGAGAACTCCCTCAGTGGGCGCGGTATTTCCCACAAACTAATAAAGGGGGACAATCCTCATTGGCTGATTATTGCACTTATTTTGTTGCATACTCTGATGGATCGTGCACTGACACTAACAGTGCACGAGCACCTGATAGAATGCTAGGTGAAGTCAGAGGAAGTAAATCTAGGTGTATGGCCTCATCATTAGTACGCACAGGATTCGTACGAGGTTCTATGACCCAGGGAAATGGTTGTTATCAACACAGGTGTGTCAACAACTATTTGGAGGTTGCTGTGGATGGTATCTGGAAAGTGTGTCCTCAAGCTGGTGGACCCATCCAGTTCCCTGGCTTTAATGGTGAATTAGTTTGTCCTGCATATCATGAACTCTGTAACAATGACCCAGTATCCGTGTCTGGTCAATGTCCGAGTTCATGTAATTTCAACGGAGATTGTATTGATGGAAGATGCCATTGCTTTCTTGGATTTCATGGTCATGATTGCAGTAGATGTTCCTGCCCCAGTAATTGCAGTGGAAATGGCATGTGCCTTTCCAATGGGATTTGTGAATGTAATACTGGATACACTGGCATCGACTGTTCCACAGCTGTGTGTGATGAGCAATGCAGCCTTCATGGAGGGGTTTGTGATAATGGAGTTTGTGAATTCCGTTGTTCTGACTATGCGGGATACACATGCCAGAACAGCTCCATGCTTCTGTCTAGTCTTTCTGTTTGCAAAAATGTGCTGGAAAAGGATGTTTCTGGACAGCTTTGTGCACCCAGCGAACCTAGCATTCTACAGCAGCTGGAAGAAGTTGTTGTCGTTCCCAACTACCATCGATTATTCCCAGGTGGTGCTCGGAAATTATTTAATATATTTGGCAGTACCTACTGTGATGAGGCTGCTAAACGGCTTGCCTGCTGGATCTCAATCCAAAAGTGTGACAAGGATGGAGACAACAGGCTTAGAGTGTGCCATTCTGCATGCCAATCTTATAATTTAGCATGTGGAGCTTCACTTGACTGCTCTGACCAAACCCTTTTCAGTAATGAGGGGGAGGGAGAGGGTCAATGCACCGGCTCTGGCGAGATGAAATTGTCATGGTTCAATCGGCTGCGTCTTAGTTTTTCTTTGAGAAATAGTTCCTTGAAAGGAATATCAGTAAGATATAGGTAA 2568 0.4529 MELMFWCTLSGFHCKLRFALIVLEILLVLALVKAHIATPYGGQLQRVGLERNSENIVSHSCIHDQIIEHRKRPGRKVYSITPQAYEPGLLKPLQPKGRALLEASTSSGPQKDSKEPIRIYLNYDAVGHSTERDCKKVGDIVKLGEPPMTSLHGSPSCDPHGNPPILGDCWYNCTFEDISREDKENRLRKALGQTAGWFRQALAVEPVKGNLRLSGYSACGQDGGVQLPRAYIEEGVSDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRNQVTEQVMDDKLGRMVNRVVLPRVVMHSRYHYSAFSRNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADHLDWGRNQGSEFVTSPCNLWKGAYHCNTTQFSGCTYNREAEGYCPILTYSGELPQWARYFPQTNKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDRMLGEVRGSKSRCMASSLVRTGFVRGSMTQGNGCYQHRCVNNYLEVAVDGIWKVCPQAGGPIQFPGFNGELVCPAYHELCNNDPVSVSGQCPSSCNFNGDCIDGRCHCFLGFHGHDCSRCSCPSNCSGNGMCLSNGICECNTGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSSLSVCKNVLEKDVSGQLCAPSEPSILQQLEEVVVVPNYHRLFPGGARKLFNIFGSTYCDEAAKRLACWISIQKCDKDGDNRLRVCHSACQSYNLACGASLDCSDQTLFSNEGEGEGQCTGSGEMKLSWFNRLRLSFSLRNSSLKGISVRYR* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3611 855 Gene3D Leishmanolysin domain 4 499 594 - -
Lja1g3611 855 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 7 828 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lja1g3611 855 Gene3D Leishmanolysin domain 3 439 497 - -
Lja1g3611 855 Pfam EGF-like domain 636 663 IPR013111 -
Lja1g3611 855 Gene3D Laminin 636 666 - -
Lja1g3611 855 ProSitePatterns EGF-like domain signature 1. 652 663 IPR000742 -
Lja1g3611 855 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 113 600 - -
Lja1g3611 855 PRINTS Leishmanolysin (M8) metalloprotease family signature 398 427 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lja1g3611 855 PRINTS Leishmanolysin (M8) metalloprotease family signature 245 274 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lja1g3611 855 Pfam Leishmanolysin 171 596 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lja1g3611 855 Gene3D Leishmanolysin , domain 2 310 435 - -
Lja1g3611 855 ProSitePatterns EGF-like domain signature 2. 652 663 IPR000742 -
Lja1g3611 855 Gene3D - 595 635 - -
Lja1g3611 855 Gene3D - 110 300 - -
Lja1g3611 855 PANTHER METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN 7 828 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3611 Lja-Chr1 44808632 44817565 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3611 K01404 - gmx:100775874 1600.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3611 1 44808632 44817565 Lja1g3611 1 44808632 44817565 ECH
Lja5g3213 5 62203519 62211665 Lja1g3611 1 44808632 44817565 PCT