Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3609 ATGCCTTCGGACGGAGCAACTTCGGCGGCGACGAATCGGCGGAAGCCGTCGTGGAGGGAGAGGGAGAATAACCGGAGGAGGGAGCGGCGTCGGAGAGCCATCGCGGCGAAGATTTACACCGGGCTTAGGGCTCAGGGGAATTACAACTTGCCTAAGCACTGTGACAACAACGAGGTTCTGAAGGCTCTCTGTGCTGAAGCTGGTTGGACTGTTGAAGAAGATGGCACCACCTATCGCAAGGGATCTAATGCAGCAGCAGGAGGAGGTGCAGGTGACGGTGCAGGAACCTCCACCAGAAACACCCCATTCTCTTCACAAAATCCAAGTCCTCTTTCATCATCATTTCCCAGCCCAATCCCTTCCTACCAAGTTAGCCCCACCTCTTCGTCATTTCCAAGCCCTTCTCGTTTGGATGCCAGCAACCTCTATCCATACATGAGGAATGTGTTTCCGGCGTCTCTACCTCCTTTGAGAATATCAAACAGTGCCCCTGTGACGCCACCCCTGTCTTCCCCGACCTCGAGGAACAATCCGAAACCAATTCCTACATGGGACTCAATTGCCAAGGCATCCATGGCAGCAGCATCCTTCAATCATCCTCTGTTTGCTGCTTCTGCTCCTGCTAGCCCCTCGCACCGACACCTTTATACCCCGCCTACTATACCCGAATGTGATGAGTCTGACTCCTCCACTGTTGAGTCTGGTCAGTGGTTGAACTTCCAAGCGTTCGCGCCCTTCGCACCTTCTCCTCCATCTGGGATGCAAATGTCTCCAACTTTTAACTTTATTAAACCTGTGATGAGGCAGCAGCAAAACATGCCTGATAGCAGGGATCAAGAGATGAGAAGTTCAGAGGCAGATTTTGGGGTACAGGTGAAGCCTTGGGTTGGGGAGAGGATTCATGAGGTGGGGTTGGATGATTTGGAGCTCACTCTTGGAAGCGGGAAGGCGCCTAGTTAG 960 0.5302 MPSDGATSAATNRRKPSWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWTVEEDGTTYRKGSNAAAGGGAGDGAGTSTRNTPFSSQNPSPLSSSFPSPIPSYQVSPTSSSFPSPSRLDASNLYPYMRNVFPASLPPLRISNSAPVTPPLSSPTSRNNPKPIPTWDSIAKASMAAASFNHPLFAASAPASPSHRHLYTPPTIPECDESDSSTVESGQWLNFQAFAPFAPSPPSGMQMSPTFNFIKPVMRQQQNMPDSRDQEMRSSEADFGVQVKPWVGERIHEVGLDDLELTLGSGKAPS* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3609 319 MobiDBLite consensus disorder prediction 14 29 - -
Lja1g3609 319 MobiDBLite consensus disorder prediction 1 31 - -
Lja1g3609 319 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 317 IPR033264 GO:0003700|GO:0006351|GO:0009742
Lja1g3609 319 Pfam BES1/BZR1 plant transcription factor, N-terminal 12 140 IPR008540 -
Lja1g3609 319 MobiDBLite consensus disorder prediction 94 135 - -
Lja1g3609 319 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 317 - -
Lja1g3609 319 MobiDBLite consensus disorder prediction 78 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3609 Lja-Chr1 44790751 44792969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3609 13 317 BZR Transcription Factor Family AT1G75080 66.667 1.10e-118 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lja1g3609 BES1_N 5.9e-59 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3609 K14503 - gmx:100781888 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3609 1 44790751 44792969 Lja1g3609 1 44790751 44792969 ECH