Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3592 ATGCAGCTCGAGTACGAGAATTATGATCCTTCATTCCCTGACCAACCTGTGGTTGACTTATACCTCCCTATGTGGGCCAAATTACCAGCCTTCAAAACTAAACCAGCCTTCATATGGGTTGAAGAGATGAACACAACCACCACCACCTCCTCTCCCCTGTTTCTCACATATCAACAACTCAATGCCTCAGTCAATGCCATCTCCTCTCACCTCCTTATTCCACTGCAAAGAGGTGACACTGTCTTGCTTCTTTGTTCTCCAGGGCTTGACCTAGTTGAACTCATATTTGGTTGTCAAAGAGCTGGTCTTTTGAGTGTCCCAATGATCCCTCCTCACCCTTCTTTTGCCAAACAAAACCACCACCACCTTGTAAGAGTGATTTCACAGACAAAGCCCAAAGCTGCCATAGCTCACCCTGATTACATCAAAAGCATTCAACACTACATTACTTGTTCCCCCAACAACAATAAGTTTGCTCACATGCTACAGAGTATCCTCTGGATTTCCATAGATGATCTCAAAAATGGTAACTTCAACAGTGATTCCATGATTTCATACAATGGTTGCAAATCAGATGAGGTTTATCTGGTTCAGTACACCTCGGGTGCCACTGGGATTCCTAAGCCAGTTCTTGTCACAGCTGGTTCAGCTGCTCATAATGTTAGAACTGCAAGAAAAGCTTATGATCTTCATCCAAACAGCACCATTGTTTCATGGTTACCTCAATACCATGATTGTGGCCTCATGTTTCTGTTGCTAACCATTGTTTCTGGTGCAACGTGTGTTCTCACGTCCCCTTCTGCATTCATCAAACGCCCAAGGCTCTGGCTTGAGTTGATGTCAGAATTCAGAGCCACATGCACCCCTGTTCCATCATTCACCTTGCCACTGGTGGTCAAGCGTGGAGGGATCAACAAAGGAACTACCCCCATAAATCTATCAACCATGAAGAACTTAATAATCATCAACGAACCAATTTACAGAGATTCAGTCGAAGAATTTGTTCACACCTTTTCACCATTTGGGTTAAGCCCCTCCTCTATTTCTCCTTCTTACGGGTTAGCAGAGAATTGCACCTTTGTTTCCACCTCATGGAGGAGTGAAACCAGTGACAATTTTTCCACCTTTCCAGATTTTCCAACCCACAACATGCTCTTACCAGTTGCAAGGCTCTGTTCTGAAAACGAGGAACATGGAGAAGAAGACGTGGAAATCATGGTTGTGAATGAAGAAACTCTTGAGCCAGTTGAGGATGGTGTTGAAGGAGAGATTTGGGTTTCTTCTCCAAGCAATGCCTCTGGCTACCTTGGCCACCCTTCTTTAACAAGGGAAATTTTCCATGCCAGGTTAAGAAACATGGTTAGAAAGTGCTTTCTCAGAACAGGGGACAGAGGCATTGTCAGAGGAAAACAGAGGTATCTGTTTGTCACTGGTCGCTGTCATGATTTGATCTTGCTCCAAGATGGTCGAAGAATCCATCCACATTACATTGAAACTGCTGCTTACAACAGTTGCAGGAAGCTACTAAGAGGTGGTTGTGTTGCAGCATTCAAAGCTTCAACCAGTGTTGTTGTAATTGTGGCAGAGATGCAGAGGATTGGAGAAAACGTGGAGACAGGGGTGTTGAGGAGCATTTGTGAAGGGATTAGAGATGGTGTTTGGAAGAAGGAGAGGGTGGAGGTTGTGAGGGTGGTTTTGGTGAAGAGTGAATGCGTTCCCAAAACCACTTCTGGGAAGTTGCAGAGATGGGAAGCGAAGGAGAAGCTTCTTGCAGGGAAGATGATTGTTCTGATGGAGATGCGATTTGGCAAAGATGCCATGAGAAGAACACAAGAAGATGTGAGAAAAGTGGGTGTAGAAACTCGCACCTCGTTGATCTCACATTTATGA 1890 0.4471 MQLEYENYDPSFPDQPVVDLYLPMWAKLPAFKTKPAFIWVEEMNTTTTTSSPLFLTYQQLNASVNAISSHLLIPLQRGDTVLLLCSPGLDLVELIFGCQRAGLLSVPMIPPHPSFAKQNHHHLVRVISQTKPKAAIAHPDYIKSIQHYITCSPNNNKFAHMLQSILWISIDDLKNGNFNSDSMISYNGCKSDEVYLVQYTSGATGIPKPVLVTAGSAAHNVRTARKAYDLHPNSTIVSWLPQYHDCGLMFLLLTIVSGATCVLTSPSAFIKRPRLWLELMSEFRATCTPVPSFTLPLVVKRGGINKGTTPINLSTMKNLIIINEPIYRDSVEEFVHTFSPFGLSPSSISPSYGLAENCTFVSTSWRSETSDNFSTFPDFPTHNMLLPVARLCSENEEHGEEDVEIMVVNEETLEPVEDGVEGEIWVSSPSNASGYLGHPSLTREIFHARLRNMVRKCFLRTGDRGIVRGKQRYLFVTGRCHDLILLQDGRRIHPHYIETAAYNSCRKLLRGGCVAAFKASTSVVVIVAEMQRIGENVETGVLRSICEGIRDGVWKKERVEVVRVVLVKSECVPKTTSGKLQRWEAKEKLLAGKMIVLMEMRFGKDAMRRTQEDVRKVGVETRTSLISHL* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3592 629 Gene3D - 482 602 IPR045851 -
Lja1g3592 629 Gene3D - 7 480 IPR042099 -
Lja1g3592 629 Pfam AMP-binding enzyme 51 486 IPR000873 -
Lja1g3592 629 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 6 610 - -
Lja1g3592 629 SUPERFAMILY Acetyl-CoA synthetase-like 30 591 - -
Lja1g3592 629 CDD FAAL 34 591 IPR040097 GO:0008610
Lja1g3592 629 PANTHER 10A19I.5 6 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3592 Lja-Chr1 44648748 44650637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3592 189 589 Monolignol Biosynthesis Gene Families AT4G19010 25.243 8.70e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3592 - - gmx:102666455 944.88