Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3561 ATGGCGTCGTCGAGTGGAAACTCCTCTACCACCACCAAGTTTCAGAGCTCTGGCTCTGAGGGTGATTTGCAGATGGTGATGGATCAGAGGAAGAACAAGAGGAAGCAATCGAATCGCGAATCGGCGAGGCGATCCAGGATGAGGAAACAGAGCCACTTGGAGGATCTGACCAGCCAGGTTACTCAGCTGACGAAGGAGAACGGCGAGATCCTCACCAACATCAACATCACCTCACAGCAATATCAGAATGTTGAGACAGAGAATTCCATTCTGAGGGCTCAGATGGGAGAGCTCAGCCAGAGGCTTCAATCTCTGAATGATATCATCAATGTGATCAAGACAAGCGCTGCTGCCACCACCACAACCACAGGGTCCTATAATGAAAGGGAATTTTACCAAACAGGTGCACTGAACTTCAGCTATCTGAACCAGCCTATCACTGCTTCTGCAGACATTTTTCAGTGGTGA 468 0.4936 MASSSGNSSTTTKFQSSGSEGDLQMVMDQRKNKRKQSNRESARRSRMRKQSHLEDLTSQVTQLTKENGEILTNINITSQQYQNVETENSILRAQMGELSQRLQSLNDIINVIKTSAAATTTTTGSYNEREFYQTGALNFSYLNQPITASADIFQW* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3561 155 Coils Coil 81 101 - -
Lja1g3561 155 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Lja1g3561 155 Gene3D - 28 83 - -
Lja1g3561 155 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Lja1g3561 155 Pfam bZIP transcription factor 30 88 IPR004827 GO:0003700|GO:0006355
Lja1g3561 155 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Lja1g3561 155 SUPERFAMILY Leucine zipper domain 30 83 IPR046347 GO:0003700|GO:0006355
Lja1g3561 155 MobiDBLite consensus disorder prediction 1 23 - -
Lja1g3561 155 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 153 - -
Lja1g3561 155 CDD bZIP_plant_GBF1 31 82 IPR045314 GO:0003700|GO:0006355
Lja1g3561 155 MobiDBLite consensus disorder prediction 1 59 - -
Lja1g3561 155 Coils Coil 46 66 - -
Lja1g3561 155 PANTHER BZIP TRANSCRIPTION FACTOR 1 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3561 Lja-Chr1 44332848 44334533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3561 26 155 bZIP Transcription Factor Family AT4G34590 49.635 9.22e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja1g3561 bZIP_1 4.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3561 K25786 - jre:108991376 181.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3561 1 44332848 44334533 Lja1g3561 1 44332848 44334533 ECH