Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3525 ATGGAAGGTGCTGATCACCAAAGTGGCAAGAAGCTGCAGCACCAAACTGGTGGTGGTGCATTTGGTCCTCCATTGCCAAGACCACCAAACCAGAAACCACCCTCTCACCCCAACATCAATATCTCAGTCCCACCACCACCACCTTCTTCTCCAATCCCTTACCCCCAACCTTGTCTTCAGAGGTTGTTGCATTCTCCGGTTTCTTCGTCCAATTCTCGGTCCCTGTCTCAACCTCAATTTGTCTCGCTAGATTCTCTGCCCCCGCTGAATTTGAACCCTCCCCGTTTTGACTCGATTCCCATTTCAACTGATGTTAAACTTAAGTCTGTGATGGTGGAAAACAAGCCTTCTGTGTCCCTCAATAGAGAAGTTCATAACACCTTTCAAGGTGGTGTTAGTGTTGCTCTTCCTCCTTGTAAAGGGCATAGGCGCTCCAAAAGTGACTCCCCTATGGGAAGCTCTGGTTACATGCAATCTTCTCCTTCCTCTGGTGGGGGAGAAAGATTGGTGTGGAAGCCGGTTCAGTTAGCGTTGAAGGCGGAGGCCAATGCCGGCTTCCAGGATGATGGTGGGGTTGTGAATGGGAGGAAAGAGGCTGCTACTGCTACTGCTGCTGACGATGATGATTTGTTTAGTCAATACATGAGCTGGGAAAACAATGATAAAATGAAATTTAATGGTGATAAGGATTTGAATAGCTGGACTAGTGGTTTTAAGACCCTTGAGAGCAATGGTAATGAAGTTGAGAGTCGTGTGGATGGGAAAGCAAGTGGTGCTAATGGGGCGAGTTCGAGCTTTTCGAAGGAAAGGGGGGAAGGATTCAAGAGGAGTTTCAATGGGGACATTGCACCGGTTTCCCGGCACCGCAGAAGTTTCTCATTGGATAGTTCCATAGGGAACTCTCATGTTGAGGATGGATTACCTAAGTCTTCTCATTTGAATAGCCAAGTTGGTAAATTCTCCCCTAGTAGCTCAATGGATAGCATTGTCATGGAGTTGGAGAAGGCTGAATTCCGCGATGAGGAGATTAAGCAAATAGTGAAAAGTGATAAACTAACTGCAATTGCCCTGACTGATTCCAAGCGTGCAAGAAGGATTCTGTCTAATCGTCAATCGGCTGCTCGTTCAAAGGAGAAGAAGGCGCAATACGTTGCTGAATTGGAGCAGAAGGTGCAAACCCTTCAGAGTGAGAGAGCTACTTTGACTACTCTGGTCACCAAATTGCAGAGGGATAACTCTGTGCTTAAAAATGAGAGCAAGGAGTACAAACTAAGGCTTCAAGCCACGGAACAACAGTCTCAGTTGAAAGAAATCCAACATTTGAGCTGTATTGTTGCAGATTTTGGTGGGGAATCCCTCGCGAATGCCATAACCCAACAGCTTGCTCTCAACCAACCAATGTTCCCGTTACAACAGCATGCCATGGCCCAACAACTTGCTCTTAACCAACCAAGGTTCCAGTTACAGCAGCAGCAGCAGCCCAACCAGCAACAGAGACATTTTGTAATGCAAAATCTCCCTGCTAAAGATGAGTGGGAGTCTCGATCAGAGGAGATTCAAGGCAATGAATTCCACCCCATGCCTTAA 1587 0.4694 MEGADHQSGKKLQHQTGGGAFGPPLPRPPNQKPPSHPNINISVPPPPPSSPIPYPQPCLQRLLHSPVSSSNSRSLSQPQFVSLDSLPPLNLNPPRFDSIPISTDVKLKSVMVENKPSVSLNREVHNTFQGGVSVALPPCKGHRRSKSDSPMGSSGYMQSSPSSGGGERLVWKPVQLALKAEANAGFQDDGGVVNGRKEAATATAADDDDLFSQYMSWENNDKMKFNGDKDLNSWTSGFKTLESNGNEVESRVDGKASGANGASSSFSKERGEGFKRSFNGDIAPVSRHRRSFSLDSSIGNSHVEDGLPKSSHLNSQVGKFSPSSSMDSIVMELEKAEFRDEEIKQIVKSDKLTAIALTDSKRARRILSNRQSAARSKEKKAQYVAELEQKVQTLQSERATLTTLVTKLQRDNSVLKNESKEYKLRLQATEQQSQLKEIQHLSCIVADFGGESLANAITQQLALNQPMFPLQQHAMAQQLALNQPRFQLQQQQQPNQQQRHFVMQNLPAKDEWESRSEEIQGNEFHPMP* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3525 528 PANTHER BZIP TRANSCRIPTION FACTOR 47 474 - -
Lja1g3525 528 MobiDBLite consensus disorder prediction 1 75 - -
Lja1g3525 528 SUPERFAMILY Leucine zipper domain 361 417 IPR046347 GO:0003700|GO:0006355
Lja1g3525 528 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 47 474 - -
Lja1g3525 528 Gene3D - 360 413 - -
Lja1g3525 528 MobiDBLite consensus disorder prediction 245 280 - -
Lja1g3525 528 MobiDBLite consensus disorder prediction 148 165 - -
Lja1g3525 528 MobiDBLite consensus disorder prediction 22 55 - -
Lja1g3525 528 CDD bZIP_plant_RF2 362 412 IPR044759 GO:0003700|GO:0006355
Lja1g3525 528 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 359 422 IPR004827 GO:0003700|GO:0006355
Lja1g3525 528 SMART brlzneu 357 421 IPR004827 GO:0003700|GO:0006355
Lja1g3525 528 Coils Coil 377 432 - -
Lja1g3525 528 Pfam bZIP transcription factor 360 419 IPR004827 GO:0003700|GO:0006355
Lja1g3525 528 MobiDBLite consensus disorder prediction 135 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3525 Lja-Chr1 43936893 43940417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3525 33 468 bZIP Transcription Factor Family AT4G38900 36.897 7.09e-60 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja1g3525 bZIP_1 9.3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3525 - - gmx:100779731 404.06