Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3522 ATGGGGAAATCTACCTCCTCCTGCTTCAAACTCATTACATGCGGCGGCGGCGATGCGGTGGAGAACCACGCATCTCAGTTCCAGGATTCTACTGATAAGCGTGGTTGGAGTTTCCGCAAGAAATCTTCAACGCATCGTGTGCTTAGCAATACCGCGACTCCATCTTCTACTGCTAATAAGGAGAGTTCACAATCTAGTAATTTCAATTTTCAACCACTTCCTGAACCTAATCTTGTCAACAAGATTTCCACACCAAATCAGAAACCCCAAGTGTCAGAAACTAATGTCATTGATGATGCTGAGAGTAATAAGGTGGATGTGAAGAATCCACCAGAGTCTTCTGCTGCCACTGCTCAGAGAGAACTGCTGCAGGTTGAGAGTATAGTGAAGTTGCAAGGTGCTATTCGCGGGTACTTGGTTCGGAAGAATTCTGTGGGAACCCTACATTGTGTTCAAGCAGTCACAAAAGATGTGGATGAGAAAACCAAAGATTGTACTTCTGACATTGACTCAAAGCCCACTGTTGGGGATTCAGTTTTGCTTACTGAGGATGAAGGGAAGGGGATTACTTATGAGGATACTAACTTCAAGTTTCAAGCAAGCAGGCCCACATTATCTATTGTAAAAGATGACTTGGAACGGGCTCCTGCTGAAGAGGCAGTTGCTTATGATGATGCTAAGGTAGCCTCGGCGGAAACTGAGTCCTTCCAAAATGAAAAATCAGTATCAGAAGCAAGTGCCCCACCGGAGCTTAATGTGAATTATCTTGATCAGAAGCCTGAAATCCCCGGTGACAAGCAAAAAAGATCTATTAAAGGATTTGTCTCGGACCAACTAGATGCTGAAGGAAAGAAACCTATAAATGGATCAAGTAAGGCCAGTAATCCTGTATTTTTTGCTGCACAGTCGAAATTTGAAGAGCTGAGTTCAATGTCAAATTTAGGTAGGACAAGCAGTTTGCCCTATCAAGATGCTGCGAGTGAATTTGAATCACAAGGAGACACCTCTTTTGTCGTCACGGATACTGTACATAGATCAAAAGAGTTAACATCTGAAAATCCGGGTCCCCATCTTTCAAGGGTTAGTGGCTCTGAATGTGGTACTGAACTCTCTATAACTTCCACTCTTGATTCACCTGGTGTATCAGAGGTTGGCGCTATGGAAAATGAGCGAGGTGCCAAAGATTTAGTAGAAGGGACGGGTAATCTTGAAAACACGATAAAGCATGATAATGAGGGCAATGTACCATGTACCCTTCCCGCGTCTGACTTAGCTACCTCTGTTTCGAATCAGTCAGAGATTGTGGATGACATCAGTGTCAATATGGTTCTCTCAGTGGCAGCTGTGGACTCTGGAAAGCCTACTATAGAAACTGAGACAAATGCATCTGACTTCCAGAAAGAACAGGCAGAGGCTGTTCTGCATGATTTAAAATCATCTCCCGATGCTTCACCTAGAAGCCATGTAACTGTCCCTGAATCACAAGGAACACCTTCAAGTCAGGTATCTGTGAAACCTAAAACGGGCAAAACCAAGAGTAGATCCAGCAATAAACGCAGTTCCCTATCAATGGGTAACAACTCACCTGCCAATGCAAATCATGATTCAGGCTCAAGAGGCAGTGGGGAGCAACTGCCTAAAGATCAGCGCAATGATGGGAAGAGACGGAATTCCTTTGGCTCAGTAAAACCTGATCACATTGATCAAGAACCTAAAGATAATACTAGTAGCAATAATTCTCTTCCTCGTTTCATGCAAGCTACACAGTCTGCTAGGGCCAAACTCAATGCAAATAACTCTCCAAGATCAAGTCCAGATGTGCATGAAGGAGATGTCCAAGTTATAAAGAGACATTCCTTACCTGGTTCCACAGGCAGGCAGGTTTCTCCACGAATTCAACGATCAATGTCTCAAGCACAGCAGAGCACAAAGGCAAACAGTGAACAGTCTCCTCAAGAGAGGAAATGGCTGAGGTGA 1977 0.4411 MGKSTSSCFKLITCGGGDAVENHASQFQDSTDKRGWSFRKKSSTHRVLSNTATPSSTANKESSQSSNFNFQPLPEPNLVNKISTPNQKPQVSETNVIDDAESNKVDVKNPPESSAATAQRELLQVESIVKLQGAIRGYLVRKNSVGTLHCVQAVTKDVDEKTKDCTSDIDSKPTVGDSVLLTEDEGKGITYEDTNFKFQASRPTLSIVKDDLERAPAEEAVAYDDAKVASAETESFQNEKSVSEASAPPELNVNYLDQKPEIPGDKQKRSIKGFVSDQLDAEGKKPINGSSKASNPVFFAAQSKFEELSSMSNLGRTSSLPYQDAASEFESQGDTSFVVTDTVHRSKELTSENPGPHLSRVSGSECGTELSITSTLDSPGVSEVGAMENERGAKDLVEGTGNLENTIKHDNEGNVPCTLPASDLATSVSNQSEIVDDISVNMVLSVAAVDSGKPTIETETNASDFQKEQAEAVLHDLKSSPDASPRSHVTVPESQGTPSSQVSVKPKTGKTKSRSSNKRSSLSMGNNSPANANHDSGSRGSGEQLPKDQRNDGKRRNSFGSVKPDHIDQEPKDNTSSNNSLPRFMQATQSARAKLNANNSPRSSPDVHEGDVQVIKRHSLPGSTGRQVSPRIQRSMSQAQQSTKANSEQSPQERKWLR* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3522 658 MobiDBLite consensus disorder prediction 450 658 - -
Lja1g3522 658 Pfam Protein of unknown function (DUF4005) 564 642 IPR025064 -
Lja1g3522 658 MobiDBLite consensus disorder prediction 17 115 - -
Lja1g3522 658 MobiDBLite consensus disorder prediction 346 365 - -
Lja1g3522 658 MobiDBLite consensus disorder prediction 483 544 - -
Lja1g3522 658 MobiDBLite consensus disorder prediction 259 293 - -
Lja1g3522 658 MobiDBLite consensus disorder prediction 261 279 - -
Lja1g3522 658 PANTHER IQ-DOMAIN 5-RELATED 177 648 - -
Lja1g3522 658 MobiDBLite consensus disorder prediction 620 658 - -
Lja1g3522 658 ProSiteProfiles IQ motif profile. 124 153 IPR000048 GO:0005515
Lja1g3522 658 MobiDBLite consensus disorder prediction 573 606 - -
Lja1g3522 658 PANTHER IQ-DOMAIN 5-RELATED 1 156 - -
Lja1g3522 658 PANTHER PROTEIN IQ-DOMAIN 32 177 648 - -
Lja1g3522 658 MobiDBLite consensus disorder prediction 42 98 - -
Lja1g3522 658 MobiDBLite consensus disorder prediction 545 572 - -
Lja1g3522 658 PANTHER PROTEIN IQ-DOMAIN 32 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3522 Lja-Chr1 43896203 43899820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3522 292 658 IQD Protein Family AT1G19870 37.436 6.47e-47 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3522 - - lja:Lj1g3v2155480.1 1274.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3522 1 43896203 43899820 Lja1g3522 1 43896203 43899820 ECH