Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3519 ATGAATATCTTCATTCTCTTAAGCATCAACTTTGTATATGGTTTCCTTGGAAATATTGTTTCAAATGCTAAGCCTCTTCCTTATGAGGCGATATTCAATTTTGGTGACTCTTTTAGTGACACTGGAAATGCTGGTATTTTGTACCCGCAATATCCAGGAAATAAAAACTCTTATGGCTCAACGTACTTCAAACATCCAACTGGGCGTATGTCAGATGGAAGATTGATGATAGATTTCATAGCCAAAGCATATGGTTTTCAATATCTGCCAGTCTATATGAATCTCACCAAAGCCAAAGACATCAAGAAAGGAGTAAATTTTGCCGTTTCTGGTGCTACTGCACTTGATGTAGAGTATTTCAAAAAGAGAGGAGGCTATCAACCAACATCGGATAAATCATTGAGTGTCCAACTTGATTGGTTCAAGAAGCTCAAACCTTCCTTATGCAAAAGAAAAGAGTGCGATAACTACTTCAAAAAATCATTATTTTTAGTGGGAGAGATTGGTGGGAATGATATTATCTCACTTCTTTCACTTAAAAATGAGACAGAACTTAAAAGAGGAGTCCCTCTAATTATTCAAACAATTGCCAATGTCACCGCTGCATTAATAGAAGAAGGTGCAGTGGAGCTAGCGGTGCCTGGAAACGTCCCAATCGGTTGCTCTGCTGGCACTATTTTATTAGCAAATAGTACCAAGAAATCGGACTATGATCAGTTTGGGTGCTTGATACATTTTAATACTTTCATGGAGAACTATAACAAGCAGCTCAAACATGCCATAAAGATACTAAGAAAGAAGTACCGTCAAGCTGAGATAATATATTTTGACTACTACAACGATACCAAACGTTTGTATCAAGCGCCCCAAAAATTTGGGTTTAGTTCTGATAAGAATGAAGCTTTAAAAGCATGTTGTGTACAATGTGGAAGTTCCGCCTCCAAAGTCTGCCCCAACCCTTCAAAATATGTAAGTTGGGACGGAGTCCACTTCACCGAAGCAACTTACAAGGTATTAGCAAAAGGACTACTTGAGGGCCATTTTGCACATCCTTCTCTAAGACCCCCTCCTTCCAAAATAGCTTAG 1086 0.3858 MNIFILLSINFVYGFLGNIVSNAKPLPYEAIFNFGDSFSDTGNAGILYPQYPGNKNSYGSTYFKHPTGRMSDGRLMIDFIAKAYGFQYLPVYMNLTKAKDIKKGVNFAVSGATALDVEYFKKRGGYQPTSDKSLSVQLDWFKKLKPSLCKRKECDNYFKKSLFLVGEIGGNDIISLLSLKNETELKRGVPLIIQTIANVTAALIEEGAVELAVPGNVPIGCSAGTILLANSTKKSDYDQFGCLIHFNTFMENYNKQLKHAIKILRKKYRQAEIIYFDYYNDTKRLYQAPQKFGFSSDKNEALKACCVQCGSSASKVCPNPSKYVSWDGVHFTEATYKVLAKGLLEGHFAHPSLRPPPSKIA* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3519 361 Coils Coil 254 274 - -
Lja1g3519 361 CDD SGNH_plant_lipase_like 30 346 IPR035669 -
Lja1g3519 361 Pfam GDSL-like Lipase/Acylhydrolase 31 341 IPR001087 GO:0016788
Lja1g3519 361 SUPERFAMILY SGNH hydrolase 32 344 - -
Lja1g3519 361 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 2 361 - -
Lja1g3519 361 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 361 - -
Lja1g3519 361 Gene3D SGNH hydrolase 18 347 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3519 Lja-Chr1 43884128 43885859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3519 19 345 Pollen Coat Proteome AT1G75910 29.107 7.23e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3519 - - ccaj:109813032 462.225