Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3517 ATGGTGATCAACTTAAGTACTAGACAAGATGTCCAGTCACAGATATCATCTGTGAGTTTAGCAGAATCACATGCCTTTTCCTTGCAAGTATTCCAGGACAACTCAGGTTTTGCATCTTCAAGCCATATTGATTTTGATGGAAGCAGCTTGCTGCAGAATAATTCTTCATGGCTGCAAGTAGCTCCAAAGCCTGCACGTAGGCGTACCTATACCAAGGTTCTGTAG 225 0.4267 MVINLSTRQDVQSQISSVSLAESHAFSLQVFQDNSGFASSSHIDFDGSSLLQNNSSWLQVAPKPARRRTYTKVL* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3517 74 PANTHER AUXIN RESPONSE FACTOR 5 1 73 - -
Lja1g3517 74 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 73 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3517 Lja-Chr1 43879301 43879702 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3517 4 73 B3 DNA Binding Superfamily AT1G19850 58.108 4.70e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3517 K14486 - vvi:100254074 83.9593