Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3501 ATGGCTTTCTCTAAACTTCTAATTGCATCTCTTCTGGTGTCTTTTATCCTTCTCCATCTCGTTCATGCTGATCAAGCGAAACTGCAGGTACCAGCACAGGCTGATCAGGTTTCTCTTCTTCAGGATATAGATTGCGATGGAGCATGTGCTGCAAGGTGCAGTAAAGCGTCTCGCCAGCGCCTCTGCCACAGAGCGTGTGGAACATGCTGCAGGCGCTGCCACTGCGTGCCGCCAGGCACTTCCGGCCACCAAGAAGTGTGTCCTTGCTATGCCAGCCTCACTACCCATGGCGGCAGAAAGAAGTGCCCCTAG 312 0.5353 MAFSKLLIASLLVSFILLHLVHADQAKLQVPAQADQVSLLQDIDCDGACAARCSKASRQRLCHRACGTCCRRCHCVPPGTSGHQEVCPCYASLTTHGGRKKCP* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3501 103 Pfam Gibberellin regulated protein 44 103 IPR003854 -
Lja1g3501 103 PANTHER GIBBERELLIN-REGULATED FAMILY PROTEIN 1 103 - -
Lja1g3501 103 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3501 Lja-Chr1 43618651 43619645 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3501 - - gmx:100790448 165.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3501 1 43618651 43619645 Lja1g3501 1 43618651 43619645 ECH
Lja5g3324 5 64401553 64403024 Lja1g3501 1 43618651 43619645 PCT
Lja1g3501 1 43618651 43619645 Lja5g3323 5 64396828 64397613 PCT