Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3486 ATGAATGATTTTAATTTATTTATATTATATTTTAACACGTTCATCACACATATTACAAGAAAACACTTGATTACTAACATATATTTATTGACGGTCACAAGGTTGTCAGGTGTGGTGGAACTTCCACAAGGTGTTTCAGTTCCAGCAGTGATAGTGTTTGGAGATTCGATCATGGATACAGGCAACAACAACAACAAGATGGGCACACTTGCGAGGTGCAATTTCCCTCCATATGGAAAAGATTTCAAGGGAGGCATACCAACTGGTCGATTTGGCAATGGAAAAGTTCCATCTGACTTTGTAGTTGAAGAATTGGGCATTAAGGAATTTCTGCCAGCATATTTAGATCCAAATCTCCAAGCTAGTGATCTCATCACTGGTGTTTGCTTTGCATCTGGAGGCTCCGGGTATGATCCTCTCACATCCAAATTAGTGTCAGCTATATCGTTGATGGATCAAATAGATTTGTTCAAAGAATACATAGGCAAGCTTCAAGTACTCGTTGGAGAGGAAAGAACAAACTTCATCATAGCAAATAGCATTTATCTTGTTGTGGTAGGCAGTAATGACATTTCCAACACATACTTTTTGAGTCACGCTAGACAAGTGCAGTATGACATTCCTGCTTACACTGACCTAATGCTCAGTTCAGCTTTGAATTTCTTTAAGGAAATATATCAACTGGGTGCAAGGAGGATAGGAGTATTCAGTGCTCCACCAATTGGGTGTGTTCCATTTCAGAGAACGCTGCTTGGAGGAATAGTGAGAAAATGTGCAGATAAATATAATGAAGCATCAGTGTTATTCAACAGCAAACTGTCCAAACAGTTGGCTTCCCTTAACAAGAGCTTGCCGGGTTCCAGGACGGTTTACCTTGATGTTTATAATCCTCTGCTTGACCTCATTGTAAACTACCAAAATTATGGTTATAAAGTTGGAGACAGAGGATGCTGTGGCACAGGAGAAGTAGAGGCCGCCGTATTATGCAACTCTTTGGCTCCACCGTGTGCTGATGTTAGTGACTACGTTTTCTGGGATAGTTTTCATCCATCGGAAAGTGTTTACAGAAAGCTCGTAGGTCCTATTCTTCATAAATATATGTACCTGTTCTTTTAG 1116 0.3996 MNDFNLFILYFNTFITHITRKHLITNIYLLTVTRLSGVVELPQGVSVPAVIVFGDSIMDTGNNNNKMGTLARCNFPPYGKDFKGGIPTGRFGNGKVPSDFVVEELGIKEFLPAYLDPNLQASDLITGVCFASGGSGYDPLTSKLVSAISLMDQIDLFKEYIGKLQVLVGEERTNFIIANSIYLVVVGSNDISNTYFLSHARQVQYDIPAYTDLMLSSALNFFKEIYQLGARRIGVFSAPPIGCVPFQRTLLGGIVRKCADKYNEASVLFNSKLSKQLASLNKSLPGSRTVYLDVYNPLLDLIVNYQNYGYKVGDRGCCGTGEVEAAVLCNSLAPPCADVSDYVFWDSFHPSESVYRKLVGPILHKYMYLFF* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3486 371 SUPERFAMILY SGNH hydrolase 50 364 - -
Lja1g3486 371 Pfam GDSL-like Lipase/Acylhydrolase 50 358 IPR001087 GO:0016788
Lja1g3486 371 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 23 366 - -
Lja1g3486 371 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 50 61 IPR008265 GO:0006629|GO:0016298
Lja1g3486 371 Gene3D SGNH hydrolase 40 365 IPR036514 -
Lja1g3486 371 CDD SGNH_plant_lipase_like 48 366 IPR035669 -
Lja1g3486 371 PANTHER GDSL ESTERASE/LIPASE EXL3 23 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3486 Lja-Chr1 43464580 43468563 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3486 46 364 Pollen Coat Proteome AT1G75910 41.615 3.25e-76 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3486 - - gmx:100793604 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3486 1 43464580 43468563 Lja1g3486 1 43464580 43468563 ECH