Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3484 ATGGAAATGTCCATGATTACTGTGGCGGTGTTTCTTTTGTGTCTTCATTATTTCAGTGCAGCAGAGGCTATCATTAAGCTTCCAGGCAATGAAACAATCCCAGGACTCATTATTTTTGGCGATTCTATCGTTGACACAGGAAGCAACAATGGCCTCCAGACTGTGGCAAAATGCAACTTCCTTCCTTATGGAAAGGATTTCCAGGGCGGGAATCACCCAACAGGAAGATTCTCCAATGGCAAGGTCCCTACCGACTTCATAGCGGAAGAATTGGGAATGAAAGGATTGATACCGTCATATTGGAGTCCAAGTTTTCAGCTAGATAATCATTTTACAGGAGTTAACTTCGCATCCGGTGGATCAGGATATGATCCTTTAAGTGCAAAAATTCAGTCGGTGATACCATTATCTAAGCAACTGAATCAATTCAAAGAATACGTGAAAAAGCTAAAAGGAAAATATGGAGAGGAAAAGACCAACTTTATCTTGTCCAAAAGTTTATTCATTGTGGTTGCCAGCAGCAATGACATTGCCAATTCTTATTATGCAACTGGAATTAGGAAATTGCAATATGATATTGGATCTTACTCTGATTTCTTGTCGCAACTTGCCTCTTCTTTTGTTAAGGAAATATATGGATTGGGAGCAAGGAGAATAGGGGTGTTTGGTGCACCCCCAGTAGGATGCTTGCCATTTATGCGAACGCTATTTGGTGGCATAGAGAGAAACTGCCTGCAAGAAATAAACTTGGCATCGAAGTTGTTCAATGCTAAATTATCAACAGAGATGGAGTACCTCAATCAAAATCTGCCTCAAGGGAAAGTGGTGTATATTGATGTTTACGACCCTTTGATTCATATCATCGAAAACCCCACCGATTATGGGTTTGAAGTTGTTGATAGAGGATGCTGTGGCACAGGGACTATAGAGGTGTCTGTACTGTGTAACCAGTTAGAACAAATTTGCAGAGACGATTCTAAGTCTGTGTTTTGGGATAGTTTTCATCCTACAGAGAGGACATACCAGATTCTTGTTGGCAAAATCATCAACAGATATATAAATAACTTCTTTTGA 1074 0.4013 MEMSMITVAVFLLCLHYFSAAEAIIKLPGNETIPGLIIFGDSIVDTGSNNGLQTVAKCNFLPYGKDFQGGNHPTGRFSNGKVPTDFIAEELGMKGLIPSYWSPSFQLDNHFTGVNFASGGSGYDPLSAKIQSVIPLSKQLNQFKEYVKKLKGKYGEEKTNFILSKSLFIVVASSNDIANSYYATGIRKLQYDIGSYSDFLSQLASSFVKEIYGLGARRIGVFGAPPVGCLPFMRTLFGGIERNCLQEINLASKLFNAKLSTEMEYLNQNLPQGKVVYIDVYDPLIHIIENPTDYGFEVVDRGCCGTGTIEVSVLCNQLEQICRDDSKSVFWDSFHPTERTYQILVGKIINRYINNFF* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3484 357 PANTHER GDSL ESTERASE/LIPASE EXL3 10 354 - -
Lja1g3484 357 SUPERFAMILY SGNH hydrolase 37 350 - -
Lja1g3484 357 Gene3D SGNH hydrolase 25 354 IPR036514 -
Lja1g3484 357 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 10 354 - -
Lja1g3484 357 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 36 47 IPR008265 GO:0006629|GO:0016298
Lja1g3484 357 CDD SGNH_plant_lipase_like 34 352 IPR035669 -
Lja1g3484 357 Pfam GDSL-like Lipase/Acylhydrolase 37 344 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3484 Lja-Chr1 43438781 43443168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3484 4 349 Pollen Coat Proteome AT1G75910 35.530 2.53e-64 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3484 - - gmx:112997680 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3484 1 43438781 43443168 Lja1g3484 1 43438781 43443168 ECH