Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3483 ATGAAAGGACATTCAGTTCTATTGCTATTATTCAACTCTCTCATCCTTTTTAATCTTGGAATCATTGAAGCAGGGAGTGGTAATGGTGCCACTAAAAGTAATCACAATGAGGTTTATATTGTGTACATGGGAGCTGCAGATTCAACAAATGCTTCCCTCCGGAACGACCATGCTCATGTTCTGAATACAGTGCTAAGAAGGAATGAGAGGGCTCTAGTACACAACTACAAACATGGTTTCTCAGGATTCGCTGCTCATTTATCAAAAGAGGAGGCAAGTTTAATTGCTAAGAAACCTGGAGTGGTGTCTGTTTTCCCTGACCCCATTCTGAAACTGCACACAACACGTTCTTGGGAATTCCTCAAGTACCAAACTCATGTCAAAATTGACACTGACCCAACCGTCACCAATTCTTCTTCATCATCAGACATCGTCATTGGCATCATAGACACAGGTGTATGGCCTGAGGCGGCAAGCTTTATGGACAAGGGTCTGGATCCTGTTCCATCAGGTTGGAAAGGCACCTGCATGAAATCACAAGATTTCAATTCATCTAACTGTAACAGGAAGCTAATCGGTGCAAGGTATTACCCTGACCCACAGTCAGACGATGACAGTGCCAGCACAGCAAGAGACTCAAACGGGCATGGGACCCACACGGCATCCACAGCGGTGGGAGCCACCGTGCTCAACGCCTCATTCTACGGTCTGGCGGAGGGGACCGCCAGGGGTGGGTCCCCTGAATCCAGGTTGGCGGTTTACAGAGTGTGCTACGACTTCGGCTGCCGTGGCTCCGCCATCCTCGCCGCGTTCGACGACGCCATCGCTGATGGAGTGGACGTGCTATCCCTCTCGCTCGGGTCGCCGTCGTATCTCCGACCAGAATTGACCACGGATCCAGTCGCCATCGGAGCGTTCCACGCCGTGGAGCGCGGCATCGTGGTGGTCTGCTCCGCCGGGAATGATGGACCGGATGTGAACACCGTTGTGAACGACGCTCCTTGGATCTTAACCGTTGCAGCCACCACCATTGACCGTGAATTTCAGTCTAATGTTGTCTTGGGTGGTAACAAAGTGATCAAGGGTGAAGCTATAAATTTCTCACCTCTTTCAAATTCCCCTGACTATCCATTGATATATGGTGAGTCTGCCAAGGCAAGCAGTGCAAAATTGGATGAGGCAAGGCAGTGCCAGAGTGATTCATTAGACGGGACTAAAGTTAAAGGAAAGATTGTGATATGCAATGGCAAAGGTGACACATCTTCAACTAGAGAATTAATTGACACGGTGAAATCAATAGGAGGATCAGGTCTTGTTCACATTACTGACCAAAATGGAGCAGTGGTATCAAATTATGGGGACTTCCCAGCAACTGTGATAAGTTCAAAAGATGCCACCACAATCCTTCAGTATGCCAATTCAACCAGCAATCCAATGGCAACAATTCTACCAACAGTTTCTGTCACTGATTACAAGCCTGCACCAATGGTGGCATATTTTTCATCAAGAGGGCCTTCAACGCTATCAAAGAACATTCTCAAGCCTGACATTGCAGCACCAGGAGTTGACATTCTTGCAGCATGGATTGGCAATGATGCAGATGATGTTCCAAAAGGAAAAAAGCCCTCACAATACAACATCATTTCAGGGACTTCCATGTCATGCCCTCATGTTTCAGGCCTTGCAGGCAGCATTAAATCTCGCCACACCACTTGGAGTGCCTCTGCCATCAAATCTGCCATCATGACCTCTGCAACTCAAAACAACAATTTGAAGGCTCCCATGACAACAGATTCAGGGTCAGTAGCCACACCTTATGACTATGGAGCAGGGGAAATGACAACCTCTGCATCATTTCAACCAGGGCTAGTTTACGAAACGAGCACCACTGACTACCTAAACTACTTGTGTTACATTGGACTTAATGTAACCACGATTAAGGTCATTTCCAGAACTGTCCCTGATAGCTTCACTTGCCCCCAGGATTCAAGTGCTGATCATGTTTCCAACATCAACTACCCTTCCATAGCAATCACCAATTTCAATGGGAAAGGAGCAATAAACGTGAGTAGAACTGTTACAAACGTTGGTGAAGAGGATGAAACAGTTTACTCCCCCATTGTTGATGCTCCCAGTGGGGTAAACATCAAGTTAATTCCAGAAAAACTCCAATTCACAAAAAGTAGCAAAAAACTAAGCTACCAAGTTATTTTCTCTTTGACTTCTTCGACCTCGCTGAAAGAAGATCTATTTGGATCCATTGCCTGGAGTAATGGTAAATATATTGTTCGAAGTCCTTTCGTACTAGCTAAGTAG 2316 0.4633 MKGHSVLLLLFNSLILFNLGIIEAGSGNGATKSNHNEVYIVYMGAADSTNASLRNDHAHVLNTVLRRNERALVHNYKHGFSGFAAHLSKEEASLIAKKPGVVSVFPDPILKLHTTRSWEFLKYQTHVKIDTDPTVTNSSSSSDIVIGIIDTGVWPEAASFMDKGLDPVPSGWKGTCMKSQDFNSSNCNRKLIGARYYPDPQSDDDSASTARDSNGHGTHTASTAVGATVLNASFYGLAEGTARGGSPESRLAVYRVCYDFGCRGSAILAAFDDAIADGVDVLSLSLGSPSYLRPELTTDPVAIGAFHAVERGIVVVCSAGNDGPDVNTVVNDAPWILTVAATTIDREFQSNVVLGGNKVIKGEAINFSPLSNSPDYPLIYGESAKASSAKLDEARQCQSDSLDGTKVKGKIVICNGKGDTSSTRELIDTVKSIGGSGLVHITDQNGAVVSNYGDFPATVISSKDATTILQYANSTSNPMATILPTVSVTDYKPAPMVAYFSSRGPSTLSKNILKPDIAAPGVDILAAWIGNDADDVPKGKKPSQYNIISGTSMSCPHVSGLAGSIKSRHTTWSASAIKSAIMTSATQNNNLKAPMTTDSGSVATPYDYGAGEMTTSASFQPGLVYETSTTDYLNYLCYIGLNVTTIKVISRTVPDSFTCPQDSSADHVSNINYPSIAITNFNGKGAINVSRTVTNVGEEDETVYSPIVDAPSGVNIKLIPEKLQFTKSSKKLSYQVIFSLTSSTSLKEDLFGSIAWSNGKYIVRSPFVLAK* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3483 771 Pfam Subtilase family 141 597 IPR000209 GO:0006508|GO:0008236
Lja1g3483 771 ProSiteProfiles Serine proteases, subtilase domain profile. 117 619 - -
Lja1g3483 771 MobiDBLite consensus disorder prediction 198 222 - -
Lja1g3483 771 Gene3D Peptidase S8/S53 domain 143 632 IPR036852 GO:0004252|GO:0006508
Lja1g3483 771 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 113 IPR037045 -
Lja1g3483 771 Gene3D - 345 489 - -
Lja1g3483 771 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.1 27 769 - -
Lja1g3483 771 Pfam Fibronectin type-III domain 670 768 IPR041469 -
Lja1g3483 771 Pfam Peptidase inhibitor I9 38 113 IPR010259 -
Lja1g3483 771 CDD Peptidases_S8_3 110 586 IPR034197 -
Lja1g3483 771 ProSitePatterns Serine proteases, subtilase family, serine active site. 550 560 IPR023828 -
Lja1g3483 771 SUPERFAMILY Subtilisin-like 113 618 IPR036852 GO:0004252|GO:0006508
Lja1g3483 771 Gene3D - 636 771 - -
Lja1g3483 771 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 769 IPR045051 -
Lja1g3483 771 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Lja1g3483 771 PRINTS Subtilisin serine protease family (S8) signature 549 565 IPR015500 -
Lja1g3483 771 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Lja1g3483 771 CDD PA_subtilisin_like 351 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3483 Lja-Chr1 43428777 43438520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3483 39 769 Subtilisin-like Serine Gene Family AT1G20150 53.485 0.0 777
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3483 K25898 - gmx:100820194 1167.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3483 1 43428777 43438520 Lja1g3483 1 43428777 43438520 ECH