Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3481 ATGGACCCTTCACCATGTAATTGCTGGAACCATTTCACCAAACCACCCTCCCCAACTCCTTCTTCTTCTTCAGAAGTATGGAAGGATCTGAAACTTTCCTCTCTCTGTGATTCCTCTATGGAGATGGAAGCTTCTTCCCCTTGGCTCAGCCTTTGTCCTGCTAGCTCTGTTTTTCAGAAACAGAGCCATCAGCATCACTCGATGCTTTCTTCCTTCAACACTTCGTTTGATGCTTCTTCCTCCAGTGGGGAGAAAATCGCTCAGCAGGATCGTGTCTATGCCTTTTCTGATCAGCGACGCAAGCGCATCCTCAAGAATCGAGAATCTGCTCTTAGATCCAGAGCGAGAAAGCAGGCTTACAAAAAGGGGTTGGAAATGAAACTTGCCCTTTTAACGGAAGAGAACTCTAGACTCAAAAGTCATGTAGCAGAGCTGCAGTTCCGCTTGTCCTCTGCTAAGCCTGCCAAAGGGGGTGCGGTTTATAGAACCATGTCATCTCCGTTTTGA 507 0.4734 MDPSPCNCWNHFTKPPSPTPSSSSEVWKDLKLSSLCDSSMEMEASSPWLSLCPASSVFQKQSHQHHSMLSSFNTSFDASSSSGEKIAQQDRVYAFSDQRRKRILKNRESALRSRARKQAYKKGLEMKLALLTEENSRLKSHVAELQFRLSSAKPAKGGAVYRTMSSPF* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3481 168 MobiDBLite consensus disorder prediction 10 25 - -
Lja1g3481 168 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 55 146 IPR043452 GO:0003700|GO:0045893
Lja1g3481 168 SMART brlzneu 94 158 IPR004827 GO:0003700|GO:0006355
Lja1g3481 168 MobiDBLite consensus disorder prediction 1 25 - -
Lja1g3481 168 PANTHER PROTEIN FD 55 146 - -
Lja1g3481 168 SUPERFAMILY Leucine zipper domain 98 146 IPR046347 GO:0003700|GO:0006355
Lja1g3481 168 Gene3D - 97 151 - -
Lja1g3481 168 CDD bZIP_plant_BZIP46 98 151 - -
Lja1g3481 168 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 96 153 IPR004827 GO:0003700|GO:0006355
Lja1g3481 168 Coils Coil 121 141 - -
Lja1g3481 168 Pfam bZIP transcription factor 97 146 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3481 Lja-Chr1 43404171 43405485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3481 77 168 bZIP Transcription Factor Family AT3G56850 40.217 7.71e-13 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja1g3481 bZIP_1 6.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3481 K14432 - lja:Lj1g3v2216450.1 317.005