Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3467 ATGCCGAATAAATCTGAATACGCTGTCTTCCTTCACGGCAATCTCGACGTGAAGGTCATGGAAGCTCGGTTTCTTCCCAACATGGACATGCTCTCGGAGCGTGTTCGGAGAATCTTCTCCGCTCTCAACTCCTGCAGCGCTTCCATGGCGGGAAAGGGAAACCACAGCCATCCACGTCACCGCCACCATAAGATCATCACCAGCGACCCTTACGTCACCGTCTGCCTCGCCGGCGCCACGGTGGCGCGAACCCGCGTCATCCCGAATTCCCAGAGCCCAACGTGGAACGAGCATTTCAATATTCCTCTGGCTCACCCTGTCACGCAGATTGAGTTCTATGTTAAGGATAATGACATGTTCGGCGCGGATTTGATCGGAATCGCAACCGTCTCCGCCGCGAGGATCTTGTCCGGGGAAGTAATCAGCGATTGGTTTCCGATTATAGGAACGTTCGGGAAGCCTCCGAAACCCGATTGCGCGGTTAGGCTGGAGTTGAAATTCACCAGATGTGAAGATAGTCCTCTGTTCCGGTCCGGCGTTGACCCGGATCCGGACCGGTTTGTTGTGCGGGATTCGTATTTTCCGGTTCGGCGTGGAGGGTCGGTGACGCTGTATCAGGACGCGCACGTGCCGGAGGCGATGTTGCCGGAGATTGAGTTGGAAGATGGGGTGGAGTTTCAGCAAGGGAAGTGCTGGGAAGATATCTGTCATGCCATTTTGGAAGCTCATCATTTGGTGTATATTGTGGGTTGGTCTATCTTTCATAAGGTGAAGCTTGTTAGAGAACCTAGCAAGCCTTTACCTAGTGGTGGGAATTTGAACCTGGGGGAGTTGCTCAAGTATAAGTCACAAGAAGGTTTGAGAGTTTTGCTTTTGGTTTGGGATGATAAGACTTCTCACAGCAAATTTTTCATTAACACGCCGGGATTGATGCAAACTCACGATGAAGAAACTCGAAAGTTTTTCAAGCATTCTTCAGTTACATGTGTGCTGTCACCTCGATATGCCAGCAGTAAGCTTAGCATTTTCAAGCAGCAGGTTGTTGGAACGCTTTTTACGCATCATCAGAAATGTGTGATTGTTGATACTCAGGCAAATGGCAACAATCGGAAGATTACTGCATTTATAGGTGGTCTAGATCTTTGTGATGGCCGGTATGATACGCCTGAGCATAGAATTTTCCGAGATCTTGACACTGTTTTTCAGGATGATTATCATAATCCCACATTTTCTGCAGGAACCAAGGGTCCAAGACAACCATGGCATGATTTACATTGCAGAATTGAAGGCCCTGCTGCATATGATATACTCACTAATTTTGAGCAGCGCTGGAGAAAAGCCACAAAATGGCATGAGTTGAGTCAAAAATTCAAGAGAGTATCTCACTGGCATGATGATTCTTTGATTAAGTTAGATCGCATCTCTTGGATTCTTAGTCCCTCTGAATCAATTGCAAAGGATGGTCCTGAATTATGGGTTTCAGAGGAGGATGACCCCGAAAATTGGCATGTTCAGGTTTTCCGATCCATAGATTCTGGCTCTTTGAAAGGATTTCCTAAGGATGTACTTGAAGCTGAGGCTCAGAATCTTGTTTGTGCGAAAAATTTGGTCGTAGACAAGAGTATTCAAACAGCGTACATACATGCCATCAGATCTGCTCAGCATTTTATTTATATTGAGAATCAATATTTCATTGGTTCATCCTTTGCTTGGCCATCTTACAAAGATACAGGTGCTGATAACTTAATTCCTATTGAGCTGGCACTGAAGATAGTTAGCAAGATAAGATCCAAGGAGAGATTTACAGTTTACATTGTCATCCCAATGTGGCCTGAAGGTGCCCCTTCTTCCGCCGCTGTGCAAGAGATTCTCTTTTGGCAGGGACAAACTATGCAAATGATGTACGAAATCATAGCTCGGGAGTTAAAATCTATGCACCTTTACAACAGCCATCCGCAAGATTACCTCAATTTTTACTGTCTTGGAAACAGAGAGAAATTGATAACTGAAGTTTCAAGCTCATATAGTTCCCCTTCAGAAAACGTCGACACGGTTTCAGCTTCACAAAAGTTCCAAAGGTTTATGATTTATGTACATGCCAAGGGAATGGTTGTGGATGATGAATATGTGATAGTTGGGTCTGCCAATATCAACCAAAGATCTTTGGCTGGTTCAAGAGATACTGAGATAGCAATGGGTGCATATCAACCCCACCATACGTGGAGTAAGAAAAAGGGACATCCACATGGTCAGGTATATGGGTATAGAATGTCCTTGTGGGCAGAACACATGGGGTTGATACATCCTTGCTTCAAAGAGCCTGAAAGTTTGGACTGCGTAAAGAGTGTGAACAAGATTGCTGAAGACAACTGGAAGAGGTACACAGCTGATGAATTTTACCCACTGCAAGGGCACCTTTTGAAGTACCCTGTGAATGTAGATGCCAATGGGAAGGTAAGCTCCATACCTAGATTTGAGTCTTTCCCAGATGTTGGTGGCAAGGTCCTTGGCTCCAGGTCTACCCTTCCTGATGCTCTAACAACATAA 2547 0.4558 MPNKSEYAVFLHGNLDVKVMEARFLPNMDMLSERVRRIFSALNSCSASMAGKGNHSHPRHRHHKIITSDPYVTVCLAGATVARTRVIPNSQSPTWNEHFNIPLAHPVTQIEFYVKDNDMFGADLIGIATVSAARILSGEVISDWFPIIGTFGKPPKPDCAVRLELKFTRCEDSPLFRSGVDPDPDRFVVRDSYFPVRRGGSVTLYQDAHVPEAMLPEIELEDGVEFQQGKCWEDICHAILEAHHLVYIVGWSIFHKVKLVREPSKPLPSGGNLNLGELLKYKSQEGLRVLLLVWDDKTSHSKFFINTPGLMQTHDEETRKFFKHSSVTCVLSPRYASSKLSIFKQQVVGTLFTHHQKCVIVDTQANGNNRKITAFIGGLDLCDGRYDTPEHRIFRDLDTVFQDDYHNPTFSAGTKGPRQPWHDLHCRIEGPAAYDILTNFEQRWRKATKWHELSQKFKRVSHWHDDSLIKLDRISWILSPSESIAKDGPELWVSEEDDPENWHVQVFRSIDSGSLKGFPKDVLEAEAQNLVCAKNLVVDKSIQTAYIHAIRSAQHFIYIENQYFIGSSFAWPSYKDTGADNLIPIELALKIVSKIRSKERFTVYIVIPMWPEGAPSSAAVQEILFWQGQTMQMMYEIIARELKSMHLYNSHPQDYLNFYCLGNREKLITEVSSSYSSPSENVDTVSASQKFQRFMIYVHAKGMVVDDEYVIVGSANINQRSLAGSRDTEIAMGAYQPHHTWSKKKGHPHGQVYGYRMSLWAEHMGLIHPCFKEPESLDCVKSVNKIAEDNWKRYTADEFYPLQGHLLKYPVNVDANGKVSSIPRFESFPDVGGKVLGSRSTLPDALTT* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3467 848 CDD C2_plant_PLD 8 168 - -
Lja1g3467 848 Pfam Phospholipase D Active site motif 351 385 IPR001736 GO:0003824
Lja1g3467 848 Pfam Phospholipase D Active site motif 695 721 IPR001736 GO:0003824
Lja1g3467 848 Gene3D Endonuclease Chain A 517 743 - -
Lja1g3467 848 ProSiteProfiles C2 domain profile. 1 145 IPR000008 -
Lja1g3467 848 SUPERFAMILY Phospholipase D/nuclease 539 780 - -
Lja1g3467 848 PIRSF PLD_plant 1 848 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lja1g3467 848 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 350 385 IPR001736 GO:0003824
Lja1g3467 848 PANTHER PHOSPHOLIPASE D 7 847 IPR015679 -
Lja1g3467 848 SMART C2_3c 14 144 IPR000008 -
Lja1g3467 848 PANTHER PHOSPHOLIPASE D 7 847 - -
Lja1g3467 848 SMART pld_4 694 721 IPR001736 GO:0003824
Lja1g3467 848 SMART pld_4 350 385 IPR001736 GO:0003824
Lja1g3467 848 Gene3D Endonuclease Chain A 222 469 - -
Lja1g3467 848 Gene3D C2 domain 11 174 IPR035892 -
Lja1g3467 848 SUPERFAMILY Phospholipase D/nuclease 190 457 - -
Lja1g3467 848 Pfam Phospholipase D C terminal 770 838 IPR024632 -
Lja1g3467 848 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 11 168 IPR035892 -
Lja1g3467 848 Pfam C2 domain 13 147 IPR000008 -
Lja1g3467 848 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 694 721 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3467 Lja-Chr1 43254939 43260777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3467 5 677 Phospholipase D Gene Family (Wang group) AT4G35790 66.328 0.0 957
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3467 K01115 - gmx:100795859 1533.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3467 1 43254939 43260777 Lja1g3467 1 43254939 43260777 ECH