Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3457 ATGTCGCTCAAATTAGCGGGAGCAACCCTGCTTCTATGTTTTTTTGCTATTTCTCTCTTTCAACTTACTCAAGCAGAAGATCCCTACAAGTTCTTCAGCTGGAATGTTACTTATGGTGACATTTACCCACTTGGTGTTCGTCAAAGGGGAATATTAATCAACGGGCAATTTCCAGGTCCAGACATTCATTCTGTTACCAACGACAACCTCATCATCAATGTCTTCAACAGTTTGGATGAGCCCTTTCTTCTCTCCTGGAATGGGATCCAGAATAGAAGGAACTCATTCGAAGATGGTGTTTTTGGAACAACATGCCCCATCCCACCAGGGAGGAACTTCACTTACATTCTTCAAGTGAAGGATCAGATTGGGAGCTTTTACTACTTCCCTTCTCTTGCTTTCCACAAAGCCGCTGGAGGTTTTGGAGGCATTAGGATCCTTAGCAGACCAAGAATTCCAGTCCCTTTCCCTGATCCTGCTGGTGATTACACTGTTCTTATTGGAGATTGGTACAAATCCAACCACACGACTTTGAAAGCTCATCTTGATAAGGGCAACAAGCTTCCTATACCTGATGGAGTTCTCATCAATGGTCGCGGACCTAATGGAGTATCTTTCAATGTAGAACAAGGGAAGACTTACAGGCTTAGAATATCAAATGTGGGGTTGCAACATTCCCTTAACTTTCGCATCCAAAACCACAAAATGAAGCTAGTAGAAGTGGAAGGAACACACACTCTTCAAACTACTTACTCTTCACTTGATGTTCATGTGGGGCAATCTTATTCAGTACTAGTTACTGCAGATCAACCTGCTCAAGACTACTACATTGTGGCTTCCACACGATTCTCCTCTAAGATTCTCACCACCACTGGAATACTTCACTATAGCAACTCTGCAGGCCCAGTTAAAGGCCCGCCACCTGGGGGGCCTACAATTCAAATTGATTGGTCTTTGAACCAGGCCCGCTCGATCAGGACTAACCTTACAGCAAGTGGACCAAGACCGAACCCACAAGGTTCCTACCATTATGGTCTGATCAACACAACCAAGACCATCATATTGGCCAGTTCACCTGGCCAAGTAAATGGCAAACAAAGATATGCAATTAACAGCGTGTCTTATGTTGCCCCAGACACTCCTCTTAAGCTCGCCGACTACTTCAAAATTTCTGGTGTTTTCCGCACCGGAAGCATATCTGAGAGACCCACTGGTGGTGGCATTTACCTTGATACTTCTGTGATGCAAGCTGACTTCAGATCTTTTGTCGAGATTGTGTTCCAAAATAATGAGAACATCGTCCAGAGCTATCATCTCGATGGCTACTCTTTCTTTGTTGTTGGTATGGATGGAGGAACATGGACAGCTTCTAGCAGGAACCAATACAATCTCCGAGATGCAGTTGCGCGTTGTACCACTCAGGTATATCCTTACTCATGGACTGCTATTTATGTTGCCCTTGACAACGTGGGAATGTGGAACTTGAGGACTGAGTTTTGGGCTCGACAATACCTCGGCCAACAGTTTTATTTGCGCGTCTACACAGCATCAACCTCAATCAGAGACGAGTTTCCTGTTCCGAAGAATGCGCTTCTCTGTGGCAGGGCAAGTGGGAGACACAAGCGACCACTTTGA 1635 0.4508 MSLKLAGATLLLCFFAISLFQLTQAEDPYKFFSWNVTYGDIYPLGVRQRGILINGQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVFGTTCPIPPGRNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTTLKAHLDKGNKLPIPDGVLINGRGPNGVSFNVEQGKTYRLRISNVGLQHSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPAQDYYIVASTRFSSKILTTTGILHYSNSAGPVKGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINTTKTIILASSPGQVNGKQRYAINSVSYVAPDTPLKLADYFKISGVFRTGSISERPTGGGIYLDTSVMQADFRSFVEIVFQNNENIVQSYHLDGYSFFVVGMDGGTWTASSRNQYNLRDAVARCTTQVYPYSWTAIYVALDNVGMWNLRTEFWARQYLGQQFYLRVYTASTSIRDEFPVPKNALLCGRASGRHKRPL* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3457 544 Gene3D - 29 150 IPR008972 -
Lja1g3457 544 Pfam Multicopper oxidase 162 298 IPR001117 -
Lja1g3457 544 Pfam Multicopper oxidase 36 149 IPR011707 GO:0005507
Lja1g3457 544 PANTHER MULTI-COPPER OXIDASE 8 537 IPR045087 -
Lja1g3457 544 Gene3D - 160 309 IPR008972 -
Lja1g3457 544 CDD CuRO_1_AAO_like_1 30 146 IPR034273 GO:0005507
Lja1g3457 544 SUPERFAMILY Cupredoxins 346 535 IPR008972 -
Lja1g3457 544 PANTHER MULTI-COPPER OXIDASE-LIKE PROTEIN 8 537 - -
Lja1g3457 544 CDD CuRO_3_AAO_like_1 378 498 IPR034275 GO:0005507
Lja1g3457 544 SUPERFAMILY Cupredoxins 156 336 IPR008972 -
Lja1g3457 544 Gene3D - 345 541 IPR008972 -
Lja1g3457 544 CDD CuRO_2_AAO_like_1 161 296 IPR034271 -
Lja1g3457 544 SUPERFAMILY Cupredoxins 25 176 IPR008972 -
Lja1g3457 544 Pfam Multicopper oxidase 380 516 IPR011706 GO:0005507|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3457 Lja-Chr1 43058427 43066056 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3457 - - gmx:100815570 1023.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3457 1 43058427 43066056 Lja1g3457 1 43058427 43066056 ECH
Lja5g3356 5 65620210 65626748 Lja1g3457 1 43058427 43066056 PCT