Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3373 ATGACTGACCATGCAAACGTTGCTGCATTTCAGGCATTTCTCCAAGGGTGGATGGTGCGGCAAAGAGCCTTTCTTGACGAGCTTCTTTCAGCTCAGCAGCACCTTCAAGAGTTGCAGGATGCTGATATGAGGCAACTGATCAACAGGGTCCTCTGCCACTATGGACAGTACTATGAAGAGAAATCAAGGATTGCCCACCAAGATGTTCTGCTTGTTTTCTCACCTCCATGGTTCAGTTCATTCGAGAGATCATTCCTTTTGGTGGCGGGGTTCAAGCCTGGAATGACGTTTCAGGTGGTGAACTCATCTGTGGCTGACTTGTCAGGAGAGCAGAGGCAGAGGTTGAGTCAGCTGAGGCAAGAGACCAAGAGGGAAGAGAGGGACCTCAACGATGAGCTGGCTAAAGTTCAGGAGGGTGTGGCGGCGCCACCGCTTGTGGATTTGGCTAGAAGCCATGGCAGGGTGTGTTTGAGTAGGTCCTTCATGGCAGAGGAGGGTGTTGTGGTTCCAAGCAGTTTCAGGGAGGTACTGGAGAATCTTGTGGAAAAAGCAGATGCTTTGAGGTCAAACACAGCTTGGAAAGTTGTGAGGATTCTCAGACCAGCTCAGATTATCAACTTTTTGGTTGCTGTGGCTGAGCTTCAAATCAGGATCAGGTCTTGGGGGTTGGATAAGGATGCCCAAGATGGAGGCCAAGGATGA 702 0.5028 MTDHANVAAFQAFLQGWMVRQRAFLDELLSAQQHLQELQDADMRQLINRVLCHYGQYYEEKSRIAHQDVLLVFSPPWFSSFERSFLLVAGFKPGMTFQVVNSSVADLSGEQRQRLSQLRQETKREERDLNDELAKVQEGVAAPPLVDLARSHGRVCLSRSFMAEEGVVVPSSFREVLENLVEKADALRSNTAWKVVRILRPAQIINFLVAVAELQIRIRSWGLDKDAQDGGQG* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3373 233 Pfam Seed dormancy control 26 101 IPR025422 GO:0006351|GO:0043565
Lja1g3373 233 ProSiteProfiles DOG1 domain profile. 7 228 IPR025422 GO:0006351|GO:0043565
Lja1g3373 233 PANTHER - 3 229 - -
Lja1g3373 233 Coils Coil 112 139 - -
Lja1g3373 233 PANTHER TRANSCRIPTION FACTOR HBP-1B(C38)-LIKE ISOFORM X1 3 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3373 Lja-Chr1 42016157 42017904 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3373 4 220 Calmodulin-binding Proteins AT1G77920 26.267 9.58e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3373 - - lja:Lj1g3v2370100.1 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3373 1 42016157 42017904 Lja1g3373 1 42016157 42017904 ECH