Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja1g3338 | ATGGCAGCTCCAATGTCGGCATTGCCTAGCTTCTTCAAAGTGATTCATGATCAAGAGCAAAAAGAAGAAACCAGGATTCCCAAGTTTATTGCGATCAATTATTGGGAAGGATTATCAAACCCAATATTTCTTAGGGTTCCAAATGGTGGTAAATGGACAATGTTTTGGGAAAAACGTGATGATGGTATTTGGCTTCACAAGAATTGGAAAAACTTTGCAGAGTTGAACTCGTTAAGATTTGGATCACTTTTACTTTTTGATTATACTGGAAAATCACATTTCCAGGTTAGAATATTTAATCCTGATACTTCAGAATGCAAATATGATGACTGTGAAGGTAGTCATCATGAACAAGTTGAGAAGCGTAGTGAGTCTGCTGTGATTCTGGAAGAAAGGGCTGATAGCGGAGGCATGGTTAAGGCTAGTTGCTCAAAAGCTGAAGCTATCATGGAAATAACCAAAAAATTTGAGTCTGAGATTCAGAACCACTTCTGTGTTGTTATATTGACTACATCTTATGTCCAGCACCATCTATTGCCGTTGCCGACTGGTTTTTCAAGAAAGCACTTGTACGGGTTACATGGGATTGCTACCATTGGAATTGGTGAGGATTTGACATCAACATGGGAAGTGAACTTCAAGTTCGACTATTCTAGAGTAGGAACCCGATTATGCTATGGATGGAGGACATTCTGTCAAGATAATAACTTGCAAGCTGGTGATGCCTGCATATTTGAACTGCTTAAATGTGACCCGGTTACTTTCAAAGTTCACATTTCAGAATGCAAATATGACAATGAAGACAGTGAAACTAACAATATTGATCCATCTAAAAGAACAAACAACTATGGCAAGAAAAAAATCAAAGTGGATTTTGATAATGTTCCAAGAGAGTTCGTGAAGAGACATAGCAGATGTCTCGGAAATTATGTGAAGTTGAGAGTAGGGGAAAGATGGTGGGATGTGAAAGTGTTAAAATATGCGAATCACACTAGGATTTGTGAAGGTTGGGGTGCATTTAAGAGAGAATGCAAATTGAATATTGATGACATTTGCGTGTTTGAGTTGGTTGATGAGGAAAAACTTGAGTTCAAAGTTTCAATTATTTCTAGAAGCCACCACTGA | 1125 | 0.3804 | MAAPMSALPSFFKVIHDQEQKEETRIPKFIAINYWEGLSNPIFLRVPNGGKWTMFWEKRDDGIWLHKNWKNFAELNSLRFGSLLLFDYTGKSHFQVRIFNPDTSECKYDDCEGSHHEQVEKRSESAVILEERADSGGMVKASCSKAEAIMEITKKFESEIQNHFCVVILTTSYVQHHLLPLPTGFSRKHLYGLHGIATIGIGEDLTSTWEVNFKFDYSRVGTRLCYGWRTFCQDNNLQAGDACIFELLKCDPVTFKVHISECKYDNEDSETNNIDPSKRTNNYGKKKIKVDFDNVPREFVKRHSRCLGNYVKLRVGERWWDVKVLKYANHTRICEGWGAFKRECKLNIDDICVFELVDEEKLEFKVSIISRSHH* | 375 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja1g3338 | 374 | SUPERFAMILY | DNA-binding pseudobarrel domain | 292 | 371 | IPR015300 | - | |
Lja1g3338 | 374 | ProSiteProfiles | B3 DNA-binding domain profile. | 295 | 372 | IPR003340 | GO:0003677 | |
Lja1g3338 | 374 | PANTHER | TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED | 141 | 261 | - | - | |
Lja1g3338 | 374 | PANTHER | TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED | 290 | 369 | - | - | |
Lja1g3338 | 374 | PANTHER | TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED | 7 | 124 | - | - | |
Lja1g3338 | 374 | SMART | B3_2 | 165 | 263 | IPR003340 | GO:0003677 | |
Lja1g3338 | 374 | SMART | B3_2 | 283 | 372 | IPR003340 | GO:0003677 | |
Lja1g3338 | 374 | SMART | B3_2 | 11 | 102 | IPR003340 | GO:0003677 | |
Lja1g3338 | 374 | CDD | B3_DNA | 9 | 100 | IPR003340 | GO:0003677 | |
Lja1g3338 | 374 | ProSiteProfiles | B3 DNA-binding domain profile. | 9 | 102 | IPR003340 | GO:0003677 | |
Lja1g3338 | 374 | PANTHER | B3 DOMAIN-CONTAINING | 7 | 124 | - | - | |
Lja1g3338 | 374 | SUPERFAMILY | DNA-binding pseudobarrel domain | 8 | 102 | IPR015300 | - | |
Lja1g3338 | 374 | ProSiteProfiles | B3 DNA-binding domain profile. | 164 | 263 | IPR003340 | GO:0003677 | |
Lja1g3338 | 374 | CDD | B3_DNA | 163 | 259 | IPR003340 | GO:0003677 | |
Lja1g3338 | 374 | Pfam | B3 DNA binding domain | 11 | 100 | IPR003340 | GO:0003677 | |
Lja1g3338 | 374 | Pfam | B3 DNA binding domain | 295 | 371 | IPR003340 | GO:0003677 | |
Lja1g3338 | 374 | Pfam | B3 DNA binding domain | 164 | 259 | IPR003340 | GO:0003677 | |
Lja1g3338 | 374 | Gene3D | - | 5 | 104 | IPR015300 | - | |
Lja1g3338 | 374 | PANTHER | B3 DOMAIN-CONTAINING | 141 | 261 | - | - | |
Lja1g3338 | 374 | PANTHER | B3 DOMAIN-CONTAINING | 290 | 369 | - | - | |
Lja1g3338 | 374 | SUPERFAMILY | DNA-binding pseudobarrel domain | 158 | 261 | IPR015300 | - | |
Lja1g3338 | 374 | CDD | B3_DNA | 295 | 370 | IPR003340 | GO:0003677 | |
Lja1g3338 | 374 | Gene3D | - | 142 | 264 | IPR015300 | - | |
Lja1g3338 | 374 | Gene3D | - | 273 | 373 | IPR015300 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja1g3338 | Lja-Chr1 | 41526931 | 41539319 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja1g3338 | 9 | 357 | REM Transcription Factor Family | AT1G26680 | 23.810 | 2.54e-15 | 75.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3 | Lja1g3338 | B3 | 1.3e-12 | CL0405 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja1g3338 | - | - | lja:Lj0g3v0114559.1 | 399.053 |