Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja1g3314 | ATGAGGACACCATCTTCTTTCACTAACATGCTATCAAACAACAGTAACATGACCATGGATGATCTTAATAACTGGGGTACTTCTGAAACTAATCATCAAGTTCCCAAATTCAACTCTGTTCAACCTCCCTCACCAACTTCTCCTTCTTCTTACTTGGCTTTTAGCCCAACTGAGTTCTTCAATTCACCTCTGTTTTCTCCAAATATTTTTGCATCTGCTGCTACTGAGAGTTTTACTGGTGAAAAGGAGGATGGGAAAAACTACTCTGACTTCTCTTTCCACACGCAAACAGAGCCTTCATCTGGCTTCCAATCTCCCTCAAGCATGTTTCAAGAGGAACCCCCAAAGAAACAAGACTTATGGAAATTCAATGAACCTATAAAGCAAACTGGTTTTTCAAGTGAATGTATAGCAACAAAAGCAGAATACCATTTACAAACTCAGAGCTTTTCCTCAGAAATGTTACCATGCAAACCAGAAATGCATAGCAATTCAATTCCTGGGTCTCATTATTCCAACTCCACGAATGCACCTCAGTCTGTTAGAGAACAACGGAGATCAGAAGACGGGTTCAATTGGAGAAAATATGGGCAAAAACAAGTAAAAGGTAGCGAAAATCCACGCAGTTATTACAAATGCACGCATCCAAGTTGCTCAATGAGGAAGAAAGTTGAGAGGTCTTTGGATGGAGAAATTACTGAAATAGTCTATAAGGGAAGTCATAACCACCCCAAGCCCCAGTCTACGAGAAGAACAAGCTCTCAACAATTTCATCAACCCTCTTCTTCATGCACCAACTCAGTTATTTCTGATATACAAGAAGATTCTTCAGCATCTGTAGGAGAGGAAGACTTTGCGGCGCAAACATCACAAACTAGTTATTCTGGAGGAAATGATGATGATTTTGGACCAGAGGCCAAAAGATGGAAGGGAGATAATGAAAATGATAGCTATTCTGCCTCAGAGAGTAGAACTGTTAAGGAACCTAGAGTTGTTGTTCAAACTAGAAGTGAAATTGATATACTTGATGATGGCTATAGGTGGAGGAAATATGGGCAGAAAGTAGTTAAGGGAAACCCAAATGCAAGGAGCTATTACAAATGCACAGCCCAAGGTTGTTCAGTGAGAAAACACGTTGAGAGAGCCGCACATGATATCAAATCTGTTATCACAACTTATGAAGGGAAGCACAACCATGATGTACCTGCTGCACGCGGTAGTGCAGGTTATAACATGAACAGAAATTCTCTGAACAGCACCGTATCAGCACCTATAAAGCCCTCAGTGGTGAGCTGTTATAATAATAGTGCATCTAGCTTCACAAATTCAGTTTATAAGACTAAGCTTCCAGAAAATGGAAATCAAGAATCATATCCACAGAACATATTGCAGAGTCCTGGAAGCTTTGGGAGGGATAGCTCATTCCTTCAGTCATTTCTATCAAAGGGTTTCTAA | 1455 | 0.4034 | MRTPSSFTNMLSNNSNMTMDDLNNWGTSETNHQVPKFNSVQPPSPTSPSSYLAFSPTEFFNSPLFSPNIFASAATESFTGEKEDGKNYSDFSFHTQTEPSSGFQSPSSMFQEEPPKKQDLWKFNEPIKQTGFSSECIATKAEYHLQTQSFSSEMLPCKPEMHSNSIPGSHYSNSTNAPQSVREQRRSEDGFNWRKYGQKQVKGSENPRSYYKCTHPSCSMRKKVERSLDGEITEIVYKGSHNHPKPQSTRRTSSQQFHQPSSSCTNSVISDIQEDSSASVGEEDFAAQTSQTSYSGGNDDDFGPEAKRWKGDNENDSYSASESRTVKEPRVVVQTRSEIDILDDGYRWRKYGQKVVKGNPNARSYYKCTAQGCSVRKHVERAAHDIKSVITTYEGKHNHDVPAARGSAGYNMNRNSLNSTVSAPIKPSVVSCYNNSASSFTNSVYKTKLPENGNQESYPQNILQSPGSFGRDSSFLQSFLSKGF* | 485 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja1g3314 | 484 | Pfam | WRKY DNA -binding domain | 188 | 244 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lja1g3314 | 484 | Pfam | WRKY DNA -binding domain | 343 | 399 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lja1g3314 | 484 | MobiDBLite | consensus disorder prediction | 242 | 298 | - | - | |
Lja1g3314 | 484 | MobiDBLite | consensus disorder prediction | 90 | 112 | - | - | |
Lja1g3314 | 484 | MobiDBLite | consensus disorder prediction | 158 | 212 | - | - | |
Lja1g3314 | 484 | SMART | WRKY_cls | 187 | 245 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lja1g3314 | 484 | SMART | WRKY_cls | 342 | 401 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lja1g3314 | 484 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 70 | 482 | IPR044810 | GO:0003700 | |
Lja1g3314 | 484 | Gene3D | WRKY domain | 329 | 395 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lja1g3314 | 484 | MobiDBLite | consensus disorder prediction | 80 | 116 | - | - | |
Lja1g3314 | 484 | SUPERFAMILY | WRKY DNA-binding domain | 334 | 402 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lja1g3314 | 484 | ProSiteProfiles | WRKY domain profile. | 337 | 402 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lja1g3314 | 484 | ProSiteProfiles | WRKY domain profile. | 182 | 246 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lja1g3314 | 484 | PANTHER | TRANSCRIPTION FACTOR WRKY FAMILY-RELATED | 70 | 482 | - | - | |
Lja1g3314 | 484 | MobiDBLite | consensus disorder prediction | 237 | 325 | - | - | |
Lja1g3314 | 484 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - | |
Lja1g3314 | 484 | MobiDBLite | consensus disorder prediction | 165 | 181 | - | - | |
Lja1g3314 | 484 | MobiDBLite | consensus disorder prediction | 301 | 325 | - | - | |
Lja1g3314 | 484 | Gene3D | WRKY domain | 172 | 247 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lja1g3314 | 484 | SUPERFAMILY | WRKY DNA-binding domain | 183 | 246 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja1g3314 | Lja-Chr1 | 41203715 | 41207196 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja1g3314 | 5 | 459 | WRKY Transcription Factor Family | AT2G38470 | 43.977 | 1.63e-105 | 322 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Lja1g3314 | WRKY | 1.9e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja1g3314 | K13424 | - | gmx:100776837 | 634.024 |