Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3286 ATGATCCTTCCAAGCATGGAAGTTCGTTTCTTCTTTCTCTTTTGCCTTATTGGGATTGGCTCAGCTCAGTTGTCTTCTAATTCTTACGCCAACACGTGTCCTCTTGCGCTTACAGCCATTAAAACACAAGTAGCCCTTGCTGTGACCAAGGAGCTTCGCATGGGAGCCTCTCTGCTTCGTCTTCATTTCCATGATTGTTTTGGATGTGATGCATCAATACTATTGGATGACACAACGAGTTTCACAGGTGAGAAGACAGCAGCTCCAAACAATAATTCAGTGAGAGGCTATGATGTTATAGACAACATCAAATCTGTAGTTGAGACGTTATGCCCTGGTGTTGTATCATGTGCTGATATATATCGTTGCTGTAGCAGCAAGAGATTCAGTTGTTTCTGTAATTGGAGTGTGCTATTGGGAAGAAGAGATTCAACTACAGCAAGTTTCAGCTCTGCTAATTCAGACTTGCCAGCACCCTTTTTAAATTTAGGTGGCCTTATCACTGCTTTCACCAACAAAGGTTTCATAACTGAAGAAATGGTTGCTCTTTCAGACTCCTCTTATGCAAAATCCTTGCAAGGAAATTGTCCTAGCGTAGGTAGTAATAGCAATATGTCCCCTCTTGACACCACCAGTGAAATCACCTTTGACAATATTTACTTCAAGAATCTGCAGAGCCAAAAGGGTCTATTACACTCAGATCAAGAGCTTTTCAACGGAGGAACCACGGACTCACAAGTGAATTCTTTTTTTTTTTTGGTCAACAATTTCAGAACTGACTTTGCCAATGCAATGGTTAAAATGGGGAACCTAAGCCCACTCACTGGGTCCAATGGCCAGATTAGGACCAACTGTAGGAAGACCAACTGA 870 0.4207 MILPSMEVRFFFLFCLIGIGSAQLSSNSYANTCPLALTAIKTQVALAVTKELRMGASLLRLHFHDCFGCDASILLDDTTSFTGEKTAAPNNNSVRGYDVIDNIKSVVETLCPGVVSCADIYRCCSSKRFSCFCNWSVLLGRRDSTTASFSSANSDLPAPFLNLGGLITAFTNKGFITEEMVALSDSSYAKSLQGNCPSVGSNSNMSPLDTTSEITFDNIYFKNLQSQKGLLHSDQELFNGGTTDSQVNSFFFLVNNFRTDFANAMVKMGNLSPLTGSNGQIRTNCRKTN* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3286 289 Gene3D - 29 156 - -
Lja1g3286 289 ProSiteProfiles Plant heme peroxidase family profile. 23 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3286 289 PRINTS Haem peroxidase superfamily signature 209 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3286 289 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3286 289 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3286 289 PANTHER PEROXIDASE 72-RELATED 15 185 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3286 289 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Lja1g3286 289 SUPERFAMILY Heme-dependent peroxidases 23 289 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja1g3286 289 Pfam Peroxidase 41 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3286 289 Gene3D Peroxidase, domain 2 157 184 - -
Lja1g3286 289 CDD secretory_peroxidase 23 288 IPR033905 GO:0004601|GO:0042744
Lja1g3286 289 Gene3D - 269 289 - -
Lja1g3286 289 Gene3D Peroxidase, domain 2 186 268 - -
Lja1g3286 289 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3286 289 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3286 289 PRINTS Plant peroxidase signature 223 240 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3286 289 PRINTS Plant peroxidase signature 263 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3286 289 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3286 289 PANTHER PEROXIDASE 185 289 - -
Lja1g3286 289 PANTHER PEROXIDASE 72-RELATED 185 289 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3286 289 PANTHER PEROXIDASE 15 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3286 Lja-Chr1 40767417 40770911 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3286 22 289 Peroxidase AT5G05340 50.505 2.72e-95 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3286 K00430 - gmx:100815142 400.979