Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3285 ATGGCTGAGCCTAGTTCATTCTCTATGACCTTTCCATCCTTGAAACTTCGCTTCTACTTCTTCATATTCTTATGCTTTAATATTGGTATAGTCTCAGCTCAATTATCCTCTGATTTTTACTCCACAACTTGTCCAAATGTGCTTTCAACCATTAAGACAGAAGTGGATACTGCTGTGAACAATGAGGCTCGTATGGGAGCATCCCTGCTCCGTCTCCATTTCCATGATTGTTTTGTCCAAGGATGTGATGCATCAATATTGTTGGATGACACATCGAATTTCACAGGTGAGAAGACAGCTCTTCCGAATGCAAATTCTGTGAGAGGTTTTGATGTAATAGACACCATCAAGTCTAAAGTGGAGAGCTTGTGCCCTGGTGTTGTCTCTTGTGCTGATATCGTTGCTGTAGCAGCTAGAGACTCAGTTGTAGCTCTTGGAGGAACAAGTTGGACAGTGCAATTGGGCAGAAGAGATTCAACCGATGCAAGTTTAAGTTTAGCAAACTCAGATTTGCCCGCTTTCTCTTTGAATTTAAGTGATCTTATCACTGCATTTTCTAACAAAGGCTTCACAGCTAAAGAAATGGTTGCTCTATCAGGATCTCACACAATTGGCCAAGCTGGCTGCATAACCTTCAGAACAAGAATATACAACGAAACCAACATCGACTCCACCTTTGCAACATCATTGCAAGCAAACTGTCCCAGTACAGGTGGTGATACTAATTTGTCCCCAATTGACACCACCAGTCAAAACAGCTTCGACAACGCTTACTACAAGAACTTGCAGAGCCAAAAGGGTCTCTTCCACTCAGATCAAGAGCTCTTCAATGGAGGATCCACAGACTCTGATGTAAATGGTTACAGCAGCGACTCTGCGAGTTTCTTGACCGACTTTGCCAACGCCATGGTTAAAATGGGGAACCTCAGCCCCCTCACTGGCTCTAACGGCCAAATTAGGACCGACTGCAAGAAAGTCAACTGA 984 0.436 MAEPSSFSMTFPSLKLRFYFFIFLCFNIGIVSAQLSSDFYSTTCPNVLSTIKTEVDTAVNNEARMGASLLRLHFHDCFVQGCDASILLDDTSNFTGEKTALPNANSVRGFDVIDTIKSKVESLCPGVVSCADIVAVAARDSVVALGGTSWTVQLGRRDSTDASLSLANSDLPAFSLNLSDLITAFSNKGFTAKEMVALSGSHTIGQAGCITFRTRIYNETNIDSTFATSLQANCPSTGGDTNLSPIDTTSQNSFDNAYYKNLQSQKGLFHSDQELFNGGSTDSDVNGYSSDSASFLTDFANAMVKMGNLSPLTGSNGQIRTDCKKVN* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3285 327 Gene3D - 38 324 - -
Lja1g3285 327 PANTHER PEROXIDASE 72-RELATED 27 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3285 327 ProSiteProfiles Plant heme peroxidase family profile. 34 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3285 327 Gene3D Peroxidase, domain 2 172 306 - -
Lja1g3285 327 PANTHER PEROXIDASE 27 327 - -
Lja1g3285 327 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3285 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3285 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3285 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3285 327 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3285 327 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3285 327 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3285 327 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3285 327 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja1g3285 327 Pfam Peroxidase 52 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3285 327 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Lja1g3285 327 SUPERFAMILY Heme-dependent peroxidases 34 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja1g3285 327 CDD secretory_peroxidase 34 326 IPR033905 GO:0004601|GO:0042744
Lja1g3285 327 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3285 327 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3285 327 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3285 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3285 327 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja1g3285 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3285 Lja-Chr1 40737975 40741398 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3285 30 327 Peroxidase AT5G05340 64.000 8.78e-143 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3285 K00430 - gmx:100815142 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1004 6 22558269 22560594 Lja1g3285 1 40737975 40741398 ECH
Lja1g3285 1 40737975 40741398 Lja1g3285 1 40737975 40741398 ECH